Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Itgb3O54890 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Itgb3O54890 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Itgb3O54890 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Itgb3O54890 Gm7052-201ENSMUST00000167568 1512 ntBASIC11.18□□□□□ -0.62
Itgb3O54890 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Itgb3O54890 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Itgb3O54890 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Itgb3O54890 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Itgb3O54890 BC043934-202ENSMUST00000185694 2356 ntBASIC11.18□□□□□ -0.62
Itgb3O54890 Gm42971-201ENSMUST00000199228 2079 ntBASIC11.18□□□□□ -0.62
Itgb3O54890 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Itgb3O54890 Gm5434-202ENSMUST00000222384 1451 ntBASIC11.18□□□□□ -0.62
Itgb3O54890 Gm5434-201ENSMUST00000071825 1451 ntBASIC11.18□□□□□ -0.62
Itgb3O54890 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Itgb3O54890 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Itgb3O54890 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Itgb3O54890 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Itgb3O54890 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
Itgb3O54890 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Itgb3O54890 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.17□□□□□ -0.62
Itgb3O54890 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Itgb3O54890 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Itgb3O54890 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Itgb3O54890 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC11.17□□□□□ -0.62
Itgb3O54890 AC124561.1-202ENSMUST00000228652 1929 ntBASIC11.17□□□□□ -0.62
Itgb3O54890 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Itgb3O54890 AC154640.1-203ENSMUST00000228316 1618 ntBASIC11.17□□□□□ -0.62
Itgb3O54890 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Itgb3O54890 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Itgb3O54890 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Itgb3O54890 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Itgb3O54890 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Itgb3O54890 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Itgb3O54890 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC11.17□□□□□ -0.62
Itgb3O54890 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Itgb3O54890 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Itgb3O54890 Gm12106-201ENSMUST00000116006 1200 ntBASIC11.17□□□□□ -0.62
Itgb3O54890 Gm8019-201ENSMUST00000119317 587 ntBASIC11.17□□□□□ -0.62
Itgb3O54890 Gm12489-201ENSMUST00000119364 148 ntBASIC11.17□□□□□ -0.62
Itgb3O54890 Gm5555-201ENSMUST00000120352 1111 ntBASIC11.17□□□□□ -0.62
Itgb3O54890 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC11.17□□□□□ -0.62
Itgb3O54890 Gm20493-201ENSMUST00000173706 213 ntBASIC11.17□□□□□ -0.62
Itgb3O54890 Gm29157-201ENSMUST00000188753 612 ntBASIC11.17□□□□□ -0.62
Itgb3O54890 Gm38038-201ENSMUST00000193803 259 ntBASIC11.17□□□□□ -0.62
Itgb3O54890 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Itgb3O54890 Gm44552-201ENSMUST00000205458 1247 ntBASIC11.17□□□□□ -0.62
Itgb3O54890 Gm45363-201ENSMUST00000210196 1294 ntBASIC11.17□□□□□ -0.62
Itgb3O54890 Gm8796-201ENSMUST00000219122 936 ntBASIC11.17□□□□□ -0.62
Itgb3O54890 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC11.17□□□□□ -0.62
Itgb3O54890 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Itgb3O54890 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Itgb3O54890 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Itgb3O54890 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Itgb3O54890 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Itgb3O54890 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC11.17□□□□□ -0.62
Itgb3O54890 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Itgb3O54890 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Itgb3O54890 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Itgb3O54890 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Itgb3O54890 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Itgb3O54890 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC11.17□□□□□ -0.62
Itgb3O54890 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Itgb3O54890 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Itgb3O54890 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Itgb3O54890 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Itgb3O54890 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Itgb3O54890 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Itgb3O54890 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Itgb3O54890 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Itgb3O54890 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Itgb3O54890 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC11.16□□□□□ -0.62
Itgb3O54890 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Itgb3O54890 Gm42449-201ENSMUST00000200349 2258 ntBASIC11.16□□□□□ -0.62
Itgb3O54890 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Itgb3O54890 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Itgb3O54890 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC11.16□□□□□ -0.62
Itgb3O54890 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Itgb3O54890 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Itgb3O54890 Gm17836-201ENSMUST00000191976 1302 ntBASIC11.16□□□□□ -0.62
Itgb3O54890 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Itgb3O54890 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Itgb3O54890 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.16□□□□□ -0.62
Itgb3O54890 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Itgb3O54890 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Itgb3O54890 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC11.16□□□□□ -0.62
Itgb3O54890 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Itgb3O54890 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Itgb3O54890 Gm11235-201ENSMUST00000117763 333 ntBASIC11.16□□□□□ -0.62
Itgb3O54890 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC11.16□□□□□ -0.62
Itgb3O54890 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Itgb3O54890 Gm8022-201ENSMUST00000191763 904 ntBASIC11.16□□□□□ -0.62
Itgb3O54890 Gm9515-201ENSMUST00000200276 647 ntBASIC11.16□□□□□ -0.62
Itgb3O54890 Gm44420-201ENSMUST00000203669 490 ntBASIC11.16□□□□□ -0.62
Itgb3O54890 Gm31941-201ENSMUST00000209689 350 ntBASIC11.16□□□□□ -0.62
Itgb3O54890 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC11.16□□□□□ -0.62
Itgb3O54890 Gm3791-201ENSMUST00000220790 768 ntBASIC11.16□□□□□ -0.62
Itgb3O54890 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC11.16□□□□□ -0.62
Itgb3O54890 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Itgb3O54890 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms