Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Cpsf3-211ENSMUST00000222968 1858 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Cdc42bpa-203ENSMUST00000097453 6704 ntTSL 5 BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Gm14028-201ENSMUST00000117434 479 ntBASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Gm12579-201ENSMUST00000118040 783 ntBASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Gm12337-201ENSMUST00000119634 400 ntBASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Gm11450-201ENSMUST00000121144 333 ntBASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Gm24990-201ENSMUST00000157406 323 ntBASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Gm28450-201ENSMUST00000187349 638 ntBASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 1700063K16Rik-202ENSMUST00000191341 952 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Gm43916-201ENSMUST00000205062 967 ntBASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Gm19091-201ENSMUST00000208120 978 ntBASIC10.05□□□□□ -0.8
Ube4bQ9ES00 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 4933416O17Rik-201ENSMUST00000220972 2122 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Gm9257-201ENSMUST00000221254 232 ntBASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Ntng1-201ENSMUST00000051253 327 ntBASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Sf3b2-201ENSMUST00000025774 3231 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Gm43795-201ENSMUST00000202051 2366 ntBASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Rfx6-202ENSMUST00000122922 3464 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Ctage5-220ENSMUST00000177225 2872 ntTSL 5 BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Nrp2-201ENSMUST00000027112 4216 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Olfr73-202ENSMUST00000129056 3048 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Kif28-201ENSMUST00000131716 3526 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Sema3e-201ENSMUST00000073957 6861 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Fkbp15-201ENSMUST00000084527 4264 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Apol11b-204ENSMUST00000181467 1933 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Gm43366-201ENSMUST00000199829 2655 ntBASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Gm37048-201ENSMUST00000194827 5578 ntBASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Apol7b-201ENSMUST00000089469 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 B3gntl1-202ENSMUST00000067399 2864 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Unc45b-205ENSMUST00000164945 3555 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Trpm1-202ENSMUST00000177102 2928 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Gm42868-201ENSMUST00000199168 2697 ntBASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Adra1a-203ENSMUST00000159365 4118 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 2310057M21Rik-201ENSMUST00000059438 6773 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Gm12381-201ENSMUST00000126314 2186 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Gm43318-201ENSMUST00000199939 1949 ntBASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Ilf3-213ENSMUST00000216892 3684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Gm14058-201ENSMUST00000116082 735 ntBASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Gm7255-201ENSMUST00000187371 908 ntBASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Gm6905-201ENSMUST00000205729 511 ntBASIC10.04□□□□□ -0.8
Ube4bQ9ES00 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Gm7594-201ENSMUST00000218595 871 ntBASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Olfr709-ps1-201ENSMUST00000072368 924 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Egf-201ENSMUST00000029653 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 4932702P03Rik-202ENSMUST00000151220 2792 ntTSL 2 BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Robo4-202ENSMUST00000115046 3878 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Stxbp5l-203ENSMUST00000114780 3476 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ube4bQ9ES00 Gm13128-201ENSMUST00000105751 1745 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms