Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd2Q99JR8 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd2Q99JR8 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd2Q99JR8 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd2Q99JR8 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd2Q99JR8 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC10.66□□□□□ -0.7
Smarcd2Q99JR8 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd2Q99JR8 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd2Q99JR8 Gm7061-201ENSMUST00000118127 1416 ntBASIC10.66□□□□□ -0.7
Smarcd2Q99JR8 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd2Q99JR8 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.66□□□□□ -0.7
Smarcd2Q99JR8 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd2Q99JR8 Gm7823-201ENSMUST00000120761 1623 ntBASIC10.66□□□□□ -0.7
Smarcd2Q99JR8 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smarcd2Q99JR8 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Gm8848-201ENSMUST00000197270 1343 ntBASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 AC154220.1-201ENSMUST00000225033 1705 ntBASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Gm24471-201ENSMUST00000104485 131 ntBASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Mrps33-202ENSMUST00000114797 500 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Gm15626-201ENSMUST00000117478 868 ntBASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Gm15554-201ENSMUST00000120406 913 ntBASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Gm15373-201ENSMUST00000121495 214 ntBASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Polr1c-203ENSMUST00000124655 829 ntTSL 5 BASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Gm4812-201ENSMUST00000182847 993 ntBASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Gm5190-201ENSMUST00000192434 357 ntBASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Gm37232-201ENSMUST00000194887 367 ntBASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Gm43997-201ENSMUST00000203986 1005 ntBASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Gm7319-201ENSMUST00000210047 778 ntBASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Gm32098-201ENSMUST00000211305 479 ntTSL 5 BASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 AC157650.1-201ENSMUST00000224582 610 ntBASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Olfr543-202ENSMUST00000219647 1456 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smarcd2Q99JR8 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Smarcd2Q99JR8 Gm32914-201ENSMUST00000203815 2228 ntBASIC10.65□□□□□ -0.71
Smarcd2Q99JR8 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Smarcd2Q99JR8 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Smarcd2Q99JR8 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
Smarcd2Q99JR8 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Smarcd2Q99JR8 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Smarcd2Q99JR8 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 6030469F06Rik-202ENSMUST00000218473 1537 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Igkv3-9-201ENSMUST00000103398 359 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Gm24066-201ENSMUST00000104515 131 ntBASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Gm15032-201ENSMUST00000118547 411 ntBASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Gm44805-201ENSMUST00000127648 765 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Gm22388-201ENSMUST00000158194 248 ntBASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Gm3687-201ENSMUST00000161710 460 ntBASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Rergl-201ENSMUST00000170650 958 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Gm26978-201ENSMUST00000182843 304 ntTSL 3 BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 E330020D12Rik-203ENSMUST00000188717 766 ntTSL 2 BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Gm2316-201ENSMUST00000190613 921 ntBASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Gm44017-201ENSMUST00000203231 740 ntTSL 5 BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Gm5189-201ENSMUST00000221796 261 ntBASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Gm18749-201ENSMUST00000222410 692 ntBASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Smarcd2Q99JR8 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms