Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Scmh1-202ENSMUST00000064991 2548 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Alx1Q8C8B0 Gm20953-201ENSMUST00000216399 2614 ntBASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Zfp133-ps-201ENSMUST00000119058 1802 ntBASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Gm10463-202ENSMUST00000195772 2889 ntBASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Gm44933-201ENSMUST00000208637 1987 ntTSL 5 BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Zfp568-204ENSMUST00000177931 2013 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Gm15036-201ENSMUST00000118880 400 ntBASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Gm16033-201ENSMUST00000144915 596 ntTSL 5 BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Cd9-ps-201ENSMUST00000174687 650 ntBASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Gm25951-201ENSMUST00000175330 64 ntBASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Gm17836-201ENSMUST00000191976 1302 ntBASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Gm8848-201ENSMUST00000197270 1343 ntBASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 6030469F06Rik-202ENSMUST00000218473 1537 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Etnppl-203ENSMUST00000166187 1712 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 AC130671.3-201ENSMUST00000227393 1897 ntBASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 5730419F03Rik-201ENSMUST00000190504 2092 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Tmem106a-201ENSMUST00000039581 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Olfr30-202ENSMUST00000215691 2404 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Alx1Q8C8B0 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Alx1Q8C8B0 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Alx1Q8C8B0 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Alx1Q8C8B0 Gm19557-201ENSMUST00000182109 2765 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Alx1Q8C8B0 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Alx1Q8C8B0 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Alx1Q8C8B0 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Alx1Q8C8B0 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Alx1Q8C8B0 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Alx1Q8C8B0 Gm24933-201ENSMUST00000103762 110 ntBASIC12.24□□□□□ -0.45
Alx1Q8C8B0 Gm23252-201ENSMUST00000103776 110 ntBASIC12.24□□□□□ -0.45
Alx1Q8C8B0 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Alx1Q8C8B0 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Alx1Q8C8B0 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Alx1Q8C8B0 Gm12381-201ENSMUST00000126314 2186 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Alx1Q8C8B0 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC12.24□□□□□ -0.45
Alx1Q8C8B0 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC12.24□□□□□ -0.45
Alx1Q8C8B0 Mir432-201ENSMUST00000157230 75 ntBASIC12.24□□□□□ -0.45
Alx1Q8C8B0 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Alx1Q8C8B0 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Alx1Q8C8B0 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC12.24□□□□□ -0.45
Alx1Q8C8B0 Gm17782-201ENSMUST00000174345 880 ntBASIC12.24□□□□□ -0.45
Alx1Q8C8B0 Gm22662-201ENSMUST00000175290 256 ntBASIC12.24□□□□□ -0.45
Alx1Q8C8B0 Gm26443-201ENSMUST00000179610 110 ntBASIC12.24□□□□□ -0.45
Alx1Q8C8B0 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Alx1Q8C8B0 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Alx1Q8C8B0 1700052H01Rik-201ENSMUST00000196142 717 ntTSL 3 BASIC12.24□□□□□ -0.45
Alx1Q8C8B0 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC12.24□□□□□ -0.45
Alx1Q8C8B0 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC12.24□□□□□ -0.45
Alx1Q8C8B0 AC153512.3-201ENSMUST00000220426 662 ntTSL 3 BASIC12.24□□□□□ -0.45
Alx1Q8C8B0 AC129217.1-201ENSMUST00000225181 642 ntBASIC12.24□□□□□ -0.45
Alx1Q8C8B0 AC139155.1-201ENSMUST00000226043 444 ntBASIC12.24□□□□□ -0.45
Alx1Q8C8B0 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Alx1Q8C8B0 Proca1-202ENSMUST00000078099 1254 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 104.2 ms