Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Mak-203ENSMUST00000165087 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Zfp317-205ENSMUST00000215372 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Gm3712-201ENSMUST00000118523 2071 ntBASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Fcgr3-204ENSMUST00000169017 1324 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Gm44933-201ENSMUST00000208637 1987 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim9Q8C7M3 Slc6a12-201ENSMUST00000032200 2644 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Gm38116-201ENSMUST00000193873 1533 ntBASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Gm45867-201ENSMUST00000208201 2317 ntBASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Gm12795-201ENSMUST00000117594 539 ntBASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Gm15136-201ENSMUST00000120552 533 ntBASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Ighv5-8-202ENSMUST00000191967 337 ntBASIC11.57□□□□□ -0.56
Trim9Q8C7M3 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Gm42617-201ENSMUST00000197640 1229 ntBASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Gm3028-201ENSMUST00000213805 1119 ntBASIC11.57□□□□□ -0.56
Trim9Q8C7M3 AC153512.3-201ENSMUST00000220426 662 ntTSL 3 BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Gm13120-201ENSMUST00000117343 1446 ntBASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Gm6783-201ENSMUST00000120916 1437 ntBASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Kng1-202ENSMUST00000039492 1985 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim9Q8C7M3 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 AC117648.1-201ENSMUST00000219777 2510 ntBASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Gm44975-201ENSMUST00000207435 1390 ntBASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Gm26670-201ENSMUST00000180429 3287 ntBASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Cers3-201ENSMUST00000066475 3250 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Gm10093-201ENSMUST00000079363 1977 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Ptgr1-201ENSMUST00000030069 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Atxn1-203ENSMUST00000180110 3901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Gm23612-201ENSMUST00000103823 110 ntBASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Gm7061-201ENSMUST00000118127 1416 ntBASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Gm15196-201ENSMUST00000121406 482 ntBASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Gm23576-201ENSMUST00000179918 110 ntBASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Mir8111-201ENSMUST00000184463 137 ntBASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Gm28671-201ENSMUST00000187036 692 ntBASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Gm43506-201ENSMUST00000200675 753 ntBASIC11.56□□□□□ -0.56
Trim9Q8C7M3 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Cdh18-207ENSMUST00000226693 2165 ntBASIC11.56□□□□□ -0.56
Trim9Q8C7M3 AC130477.1-201ENSMUST00000226982 420 ntBASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Trim9Q8C7M3 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC11.56□□□□□ -0.56
Trim9Q8C7M3 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms