Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Zfp354a-201ENSMUST00000020628 1719 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Zfp568-204ENSMUST00000177931 2013 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Gm12990-201ENSMUST00000120372 468 ntBASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Gm16441-201ENSMUST00000138176 924 ntBASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Gm6038-201ENSMUST00000154310 948 ntBASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Gm7600-201ENSMUST00000209657 785 ntBASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Gm19040-201ENSMUST00000203280 4726 ntBASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Gm37160-201ENSMUST00000193081 1689 ntBASIC10.84□□□□□ -0.67
Trub1Q8C0D0 5730419F03Rik-201ENSMUST00000190504 2092 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Hist4h4-201ENSMUST00000179285 2863 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Ccdc87-201ENSMUST00000088653 3163 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Sfmbt2-202ENSMUST00000114861 1813 ntTSL 5 BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Trub1Q8C0D0 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Trub1Q8C0D0 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Gm13022-201ENSMUST00000121181 285 ntBASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Gm38210-201ENSMUST00000191944 809 ntBASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Gm43564-201ENSMUST00000196185 211 ntBASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Gm42803-201ENSMUST00000201051 451 ntBASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Gm3793-201ENSMUST00000204973 672 ntBASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Gm18059-201ENSMUST00000208073 580 ntBASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Gm45308-201ENSMUST00000210610 415 ntBASIC10.83□□□□□ -0.68
Trub1Q8C0D0 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 CT010480.2-201ENSMUST00000225424 737 ntBASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 AC124561.1-202ENSMUST00000228652 1929 ntBASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Gm45161-201ENSMUST00000207316 2263 ntBASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Creb3l4-202ENSMUST00000107369 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trub1Q8C0D0 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Gm21817-201ENSMUST00000178584 2583 ntBASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Cpvl-201ENSMUST00000166545 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Scnn1a-206ENSMUST00000176655 3354 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms