Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pcdh19Q80TF3 Ralgps1-201ENSMUST00000042615 6029 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Pcdh19Q80TF3 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pcdh19Q80TF3 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pcdh19Q80TF3 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Pcdh19Q80TF3 Gm5697-201ENSMUST00000122295 2482 ntBASIC10.46□□□□□ -0.74
Pcdh19Q80TF3 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pcdh19Q80TF3 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pcdh19Q80TF3 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pcdh19Q80TF3 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Pcdh19Q80TF3 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pcdh19Q80TF3 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Pcdh19Q80TF3 Gm43660-201ENSMUST00000200956 6548 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Pcdh19Q80TF3 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
Pcdh19Q80TF3 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Gm45124-201ENSMUST00000206723 2755 ntBASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Gm28624-201ENSMUST00000186430 2131 ntBASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Gm5434-202ENSMUST00000222384 1451 ntBASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Gm5434-201ENSMUST00000071825 1451 ntBASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Gm7541-201ENSMUST00000118361 535 ntBASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Gm8019-201ENSMUST00000119317 587 ntBASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Gm20854-201ENSMUST00000178889 1002 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Gm8601-201ENSMUST00000182096 909 ntBASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Mir6387-201ENSMUST00000184042 108 ntBASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Gm29107-201ENSMUST00000190910 347 ntBASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Wbp1-209ENSMUST00000205023 716 ntBASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 AC155300.1-201ENSMUST00000219134 480 ntBASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 AC161172.1-201ENSMUST00000227801 486 ntBASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pcdh19Q80TF3 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Gm26848-201ENSMUST00000181052 2467 ntTSL 5 BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Gm42851-201ENSMUST00000201325 1411 ntBASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Wdr62-201ENSMUST00000108190 4742 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Gm12418-201ENSMUST00000118116 942 ntBASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Gm12950-201ENSMUST00000121683 417 ntBASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Gm25872-201ENSMUST00000177784 100 ntBASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Gm5808-201ENSMUST00000178090 357 ntBASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Gm6686-201ENSMUST00000178455 258 ntBASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Gm28941-201ENSMUST00000185536 1017 ntBASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Gm28671-201ENSMUST00000187036 692 ntBASIC10.44□□□□□ -0.74
Pcdh19Q80TF3 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms