Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Tpm3-204ENSMUST00000119570 2233 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cd9P40240 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cd9P40240 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cd9P40240 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cd9P40240 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cd9P40240 Gm45597-201ENSMUST00000211524 1994 ntBASIC10.39□□□□□ -0.75
Cd9P40240 Gm4865-201ENSMUST00000196284 1309 ntBASIC10.39□□□□□ -0.75
Cd9P40240 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cd9P40240 Plscr2-205ENSMUST00000180154 1900 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cd9P40240 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cd9P40240 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.39□□□□□ -0.75
Cd9P40240 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cd9P40240 Samsn1-201ENSMUST00000114239 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cd9P40240 St6galnac2-206ENSMUST00000144398 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cd9P40240 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cd9P40240 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cd9P40240 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC10.39□□□□□ -0.75
Cd9P40240 Gm14174-201ENSMUST00000153158 161 ntTSL 5 BASIC10.39□□□□□ -0.75
Cd9P40240 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Cd9P40240 Myl6-201ENSMUST00000164181 665 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cd9P40240 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC10.39□□□□□ -0.75
Cd9P40240 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cd9P40240 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC10.39□□□□□ -0.75
Cd9P40240 Gm7539-201ENSMUST00000189789 630 ntBASIC10.39□□□□□ -0.75
Cd9P40240 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cd9P40240 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cd9P40240 Gm45219-201ENSMUST00000205602 465 ntBASIC10.39□□□□□ -0.75
Cd9P40240 Gm7594-201ENSMUST00000218595 871 ntBASIC10.39□□□□□ -0.75
Cd9P40240 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC10.39□□□□□ -0.75
Cd9P40240 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Cd9P40240 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Cd9P40240 AC156016.4-201ENSMUST00000227470 647 ntBASIC10.39□□□□□ -0.75
Cd9P40240 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC10.39□□□□□ -0.75
Cd9P40240 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Cd9P40240 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cd9P40240 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cd9P40240 4930451G09Rik-201ENSMUST00000090457 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cd9P40240 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cd9P40240 Pde9a-206ENSMUST00000134525 1818 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Cd9P40240 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cd9P40240 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC10.39□□□□□ -0.75
Cd9P40240 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cd9P40240 Gm21817-201ENSMUST00000178584 2583 ntBASIC10.39□□□□□ -0.75
Cd9P40240 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cd9P40240 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cd9P40240 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cd9P40240 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Cd9P40240 1700019J19Rik-205ENSMUST00000216531 2813 ntTSL 5 BASIC10.39□□□□□ -0.75
Cd9P40240 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cd9P40240 Pde4d-202ENSMUST00000079975 2280 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Cd9P40240 Blnk-201ENSMUST00000054769 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Mfsd11-201ENSMUST00000021173 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Cd9P40240 Cfap61-202ENSMUST00000118002 3230 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC10.38□□□□□ -0.75
Cd9P40240 Gm12947-201ENSMUST00000116114 420 ntBASIC10.38□□□□□ -0.75
Cd9P40240 Gm15602-201ENSMUST00000116162 465 ntBASIC10.38□□□□□ -0.75
Cd9P40240 Ak3l2-ps-201ENSMUST00000120282 672 ntBASIC10.38□□□□□ -0.75
Cd9P40240 Gm14219-201ENSMUST00000120414 288 ntBASIC10.38□□□□□ -0.75
Cd9P40240 Gm15196-201ENSMUST00000121406 482 ntBASIC10.38□□□□□ -0.75
Cd9P40240 Gm12035-201ENSMUST00000121890 623 ntBASIC10.38□□□□□ -0.75
Cd9P40240 Gm20455-201ENSMUST00000174100 1138 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Gm25953-201ENSMUST00000175338 83 ntBASIC10.38□□□□□ -0.75
Cd9P40240 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Rian-213ENSMUST00000182981 1219 ntTSL 5 BASIC10.38□□□□□ -0.75
Cd9P40240 Mir6360-201ENSMUST00000184278 126 ntBASIC10.38□□□□□ -0.75
Cd9P40240 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC10.38□□□□□ -0.75
Cd9P40240 Gm18182-201ENSMUST00000191380 1251 ntBASIC10.38□□□□□ -0.75
Cd9P40240 Gm37976-201ENSMUST00000193827 345 ntBASIC10.38□□□□□ -0.75
Cd9P40240 Gm34379-201ENSMUST00000195036 290 ntBASIC10.38□□□□□ -0.75
Cd9P40240 Gm43249-201ENSMUST00000200464 458 ntBASIC10.38□□□□□ -0.75
Cd9P40240 Gm43460-201ENSMUST00000202491 1057 ntBASIC10.38□□□□□ -0.75
Cd9P40240 Gm26782-203ENSMUST00000227103 751 ntBASIC10.38□□□□□ -0.75
Cd9P40240 AC154683.1-201ENSMUST00000228409 1284 ntBASIC10.38□□□□□ -0.75
Cd9P40240 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Hmgb4-201ENSMUST00000053830 746 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Cd9P40240 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Cd9P40240 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Speer4c-201ENSMUST00000095005 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 Speer4d-201ENSMUST00000095006 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cd9P40240 4932702P03Rik-202ENSMUST00000151220 2792 ntTSL 2 BASIC10.38□□□□□ -0.75
Cd9P40240 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Cd9P40240 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms