Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cd28P31041 Ctnnd1-207ENSMUST00000111676 5852 ntTSL 5 BASIC9.2□□□□□ -0.94
Cd28P31041 Kat6b-207ENSMUST00000182855 6791 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cd28P31041 Prmt7-201ENSMUST00000071592 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 9130221F21Rik-201ENSMUST00000206867 2631 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 AC124426.1-201ENSMUST00000220871 2707 ntTSL 2 BASIC9.19□□□□□ -0.94
Cd28P31041 Adra1a-205ENSMUST00000161339 2788 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 1700055D18Rik-202ENSMUST00000186030 3720 ntBASIC9.19□□□□□ -0.94
Cd28P31041 Sftpa1-202ENSMUST00000170719 2854 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 Tmco4-201ENSMUST00000043042 2922 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 Lipa-201ENSMUST00000049572 2969 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 Gm42521-201ENSMUST00000199190 2040 ntBASIC9.19□□□□□ -0.94
Cd28P31041 Arhgap19-201ENSMUST00000026150 5103 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 Sepsecs-201ENSMUST00000031069 5252 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 Zcchc8-201ENSMUST00000031376 4286 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 Tmem184b-205ENSMUST00000228002 3315 ntBASIC9.19□□□□□ -0.94
Cd28P31041 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 Nrxn1-225ENSMUST00000197268 2280 ntTSL 3 BASIC9.19□□□□□ -0.94
Cd28P31041 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 Adamtsl3-203ENSMUST00000173287 7249 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Cd28P31041 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC9.19□□□□□ -0.94
Cd28P31041 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 Gm15725-201ENSMUST00000119947 1090 ntBASIC9.19□□□□□ -0.94
Cd28P31041 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC9.19□□□□□ -0.94
Cd28P31041 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
Cd28P31041 Gm37390-201ENSMUST00000192452 872 ntBASIC9.19□□□□□ -0.94
Cd28P31041 Gm45331-201ENSMUST00000209868 554 ntBASIC9.19□□□□□ -0.94
Cd28P31041 Gm45398-201ENSMUST00000210561 165 ntBASIC9.19□□□□□ -0.94
Cd28P31041 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 Gm9899-201ENSMUST00000065519 555 ntBASIC9.19□□□□□ -0.94
Cd28P31041 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Cd28P31041 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Cd28P31041 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 Sh3pxd2b-201ENSMUST00000038753 7413 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 Gpr156-201ENSMUST00000061274 4581 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 Slc7a14-202ENSMUST00000108245 3080 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 Gm6024-201ENSMUST00000117850 1558 ntBASIC9.19□□□□□ -0.94
Cd28P31041 5430430B14Rik-201ENSMUST00000209427 1630 ntBASIC9.19□□□□□ -0.94
Cd28P31041 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 Gm42449-201ENSMUST00000200349 2258 ntBASIC9.19□□□□□ -0.94
Cd28P31041 Htr2c-201ENSMUST00000036303 4747 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC9.19□□□□□ -0.94
Cd28P31041 Slit2-208ENSMUST00000173107 9960 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cd28P31041 Gm45191-201ENSMUST00000205846 5439 ntBASIC9.18□□□□□ -0.94
Cd28P31041 Arhgap36-201ENSMUST00000042444 2733 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Cd28P31041 Tacc2-203ENSMUST00000084513 9029 ntAPPRIS P4 TSL 5 BASIC9.18□□□□□ -0.94
Cd28P31041 Zfp275-201ENSMUST00000033731 6376 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Cacna1c-222ENSMUST00000190285 6585 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Dpy19l2-201ENSMUST00000133010 3442 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Atg9a-201ENSMUST00000040689 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Galnt1-201ENSMUST00000000430 3977 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Tia1-202ENSMUST00000095753 4477 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Xdh-201ENSMUST00000024866 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Topaz1-201ENSMUST00000178679 5030 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Nfia-203ENSMUST00000092532 9382 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Gm23200-201ENSMUST00000104379 132 ntBASIC9.18□□□□□ -0.94
Cd28P31041 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Cd28P31041 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Cd28P31041 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Gm12856-201ENSMUST00000119471 1293 ntBASIC9.18□□□□□ -0.94
Cd28P31041 Gm15784-201ENSMUST00000120260 1462 ntBASIC9.18□□□□□ -0.94
Cd28P31041 Gm11736-201ENSMUST00000121468 505 ntBASIC9.18□□□□□ -0.94
Cd28P31041 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC9.18□□□□□ -0.94
Cd28P31041 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC9.18□□□□□ -0.94
Cd28P31041 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC9.18□□□□□ -0.94
Cd28P31041 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Tdp1-207ENSMUST00000153627 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC9.18□□□□□ -0.94
Cd28P31041 Pde1c-204ENSMUST00000164752 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Cd28P31041 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC9.18□□□□□ -0.94
Cd28P31041 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 1810034E14Rik-201ENSMUST00000181403 1805 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Cd28P31041 Il6st-210ENSMUST00000184949 2571 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Cd28P31041 Gm8918-201ENSMUST00000190587 1087 ntBASIC9.18□□□□□ -0.94
Cd28P31041 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Cd28P31041 Gm37302-201ENSMUST00000192958 2998 ntBASIC9.18□□□□□ -0.94
Cd28P31041 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Gm38413-202ENSMUST00000198449 2348 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 C230057M02Rik-201ENSMUST00000212334 3306 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Gm8162-201ENSMUST00000213951 665 ntBASIC9.18□□□□□ -0.94
Cd28P31041 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC9.18□□□□□ -0.94
Cd28P31041 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Cd28P31041 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms