Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Gm6783-201ENSMUST00000120916 1437 ntBASIC10.82□□□□□ -0.68
Rc3h2P0C090 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Gm42851-201ENSMUST00000201325 1411 ntBASIC10.82□□□□□ -0.68
Rc3h2P0C090 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.82□□□□□ -0.68
Rc3h2P0C090 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Rc3h2P0C090 Gm42971-201ENSMUST00000199228 2079 ntBASIC10.81□□□□□ -0.68
Rc3h2P0C090 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rc3h2P0C090 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Rc3h2P0C090 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rc3h2P0C090 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Rc3h2P0C090 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rc3h2P0C090 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rc3h2P0C090 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC10.81□□□□□ -0.68
Rc3h2P0C090 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rc3h2P0C090 Gm23255-201ENSMUST00000102244 110 ntBASIC10.81□□□□□ -0.68
Rc3h2P0C090 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Rc3h2P0C090 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rc3h2P0C090 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC10.81□□□□□ -0.68
Rc3h2P0C090 Mir1941-201ENSMUST00000157834 83 ntBASIC10.81□□□□□ -0.68
Rc3h2P0C090 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Rc3h2P0C090 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rc3h2P0C090 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rc3h2P0C090 Gm5543-201ENSMUST00000193329 1091 ntBASIC10.81□□□□□ -0.68
Rc3h2P0C090 Gm37301-201ENSMUST00000195412 568 ntBASIC10.81□□□□□ -0.68
Rc3h2P0C090 Gm44155-201ENSMUST00000203923 412 ntBASIC10.81□□□□□ -0.68
Rc3h2P0C090 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rc3h2P0C090 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Rc3h2P0C090 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rc3h2P0C090 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rc3h2P0C090 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rc3h2P0C090 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rc3h2P0C090 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rc3h2P0C090 Cfap61-202ENSMUST00000118002 3230 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rc3h2P0C090 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Rc3h2P0C090 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.81□□□□□ -0.68
Rc3h2P0C090 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.81□□□□□ -0.68
Rc3h2P0C090 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Rc3h2P0C090 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rc3h2P0C090 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rc3h2P0C090 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Gm37697-201ENSMUST00000195680 1844 ntBASIC10.8□□□□□ -0.68
Rc3h2P0C090 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Gm11573-201ENSMUST00000119956 394 ntBASIC10.8□□□□□ -0.68
Rc3h2P0C090 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Gm23582-201ENSMUST00000158530 139 ntBASIC10.8□□□□□ -0.68
Rc3h2P0C090 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Gm8643-201ENSMUST00000195228 625 ntBASIC10.8□□□□□ -0.68
Rc3h2P0C090 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Rc3h2P0C090 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC10.8□□□□□ -0.68
Rc3h2P0C090 AC133517.1-201ENSMUST00000225825 594 ntBASIC10.8□□□□□ -0.68
Rc3h2P0C090 AC141884.2-201ENSMUST00000228811 775 ntBASIC10.8□□□□□ -0.68
Rc3h2P0C090 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rc3h2P0C090 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Gm4865-201ENSMUST00000196284 1309 ntBASIC10.8□□□□□ -0.68
Rc3h2P0C090 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Rc3h2P0C090 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.79□□□□□ -0.68
Rc3h2P0C090 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Rc3h2P0C090 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rc3h2P0C090 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rc3h2P0C090 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms