Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Scnn1a-206ENSMUST00000176655 3354 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sec61a2Q9JLR1 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 9130019O22Rik-201ENSMUST00000049052 3878 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Cacna1c-208ENSMUST00000187317 6663 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Gm12106-201ENSMUST00000116006 1200 ntBASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Gm9673-201ENSMUST00000119287 781 ntBASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Gm13019-201ENSMUST00000120000 276 ntBASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Gm22379-201ENSMUST00000157480 131 ntBASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Gm16030-201ENSMUST00000159098 603 ntBASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Gm17192-201ENSMUST00000169031 511 ntBASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 AC238811.4-201ENSMUST00000178019 1246 ntBASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 AC238940.3-201ENSMUST00000178830 1246 ntBASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Mir6958-201ENSMUST00000184207 73 ntBASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Gm32111-201ENSMUST00000207689 846 ntBASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Gm18466-201ENSMUST00000209147 499 ntBASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Gm37697-201ENSMUST00000195680 1844 ntBASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Extl1-201ENSMUST00000030643 4126 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Pogk-206ENSMUST00000169324 7034 ntAPPRIS ALT2 TSL 3 BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Fhad1-203ENSMUST00000105780 4809 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Lpin1-201ENSMUST00000067124 5581 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC9.53□□□□□ -0.88
Sec61a2Q9JLR1 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
Sec61a2Q9JLR1 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Sec61a2Q9JLR1 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC9.52□□□□□ -0.88
Sec61a2Q9JLR1 Ncoa3-201ENSMUST00000088095 7531 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Sec61a2Q9JLR1 Stard13-201ENSMUST00000062015 5526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Sec61a2Q9JLR1 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Sec61a2Q9JLR1 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Sec61a2Q9JLR1 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.88
Sec61a2Q9JLR1 Zfp24-201ENSMUST00000066497 5732 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Sec61a2Q9JLR1 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Gm16518-201ENSMUST00000117960 508 ntBASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Gm11380-201ENSMUST00000118067 560 ntBASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Gm11422-201ENSMUST00000118925 1103 ntBASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Gm13104-201ENSMUST00000119651 1446 ntBASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC9.52□□□□□ -0.89
Sec61a2Q9JLR1 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms