Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Zfp532-201ENSMUST00000049016 5503 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Ctc1-201ENSMUST00000021278 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Synj2-207ENSMUST00000115788 3498 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Arhgap4-205ENSMUST00000114407 3051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 B930082K07Rik-201ENSMUST00000181046 2478 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Shcbp1-201ENSMUST00000022945 2156 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 BC025920-202ENSMUST00000119492 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Vps8-202ENSMUST00000096192 4942 ntTSL 5 BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Gm8199-201ENSMUST00000121323 823 ntBASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Gm8459-201ENSMUST00000162504 760 ntBASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Gm5733-201ENSMUST00000190232 939 ntBASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 AU022133-201ENSMUST00000200601 873 ntBASIC10.07□□□□□ -0.8
Ube4bQ9ES00 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.07□□□□□ -0.8
Ube4bQ9ES00 CT025694.1-201ENSMUST00000226188 934 ntBASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Dgkeos-204ENSMUST00000178493 1902 ntTSL 5 BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Wnk4-201ENSMUST00000103108 4117 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Cald1-203ENSMUST00000115021 4041 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Gm19410-201ENSMUST00000207505 6352 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Gm43820-201ENSMUST00000199414 3346 ntBASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Zfp58-201ENSMUST00000076123 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Arid1b-203ENSMUST00000115799 9888 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 4930570G19Rik-201ENSMUST00000139363 3112 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Dcx-204ENSMUST00000112856 1333 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ube4bQ9ES00 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Gm35394-201ENSMUST00000196434 3252 ntTSL 5 BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Vps8-205ENSMUST00000118138 3060 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Ppfia1-202ENSMUST00000182226 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Gm37731-201ENSMUST00000194545 2237 ntBASIC10.06□□□□□ -0.8
Ube4bQ9ES00 AU040320-203ENSMUST00000102608 4073 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Tuba4a-202ENSMUST00000186213 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Gm13035-201ENSMUST00000117496 342 ntBASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Gm15515-201ENSMUST00000117827 822 ntBASIC10.06□□□□□ -0.8
Ube4bQ9ES00 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Gm27552-201ENSMUST00000183351 62 ntBASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Gm27844-201ENSMUST00000183613 62 ntBASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Gm5865-201ENSMUST00000198713 637 ntBASIC10.06□□□□□ -0.8
Ube4bQ9ES00 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Mir219a-1-201ENSMUST00000083621 110 ntBASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Epb41-206ENSMUST00000105974 4844 ntTSL 5 BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Nrxn1-225ENSMUST00000197268 2280 ntTSL 3 BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Rreb1-207ENSMUST00000128570 8436 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Scrn3-201ENSMUST00000090811 3309 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Rorb-202ENSMUST00000112828 2854 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Celf2-211ENSMUST00000142941 2338 ntTSL 5 BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Pcdh1-201ENSMUST00000057185 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Xab2-201ENSMUST00000019614 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 4930451G09Rik-201ENSMUST00000090457 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Rasgrp4-201ENSMUST00000032811 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Rabgef1-201ENSMUST00000026390 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Vash2-202ENSMUST00000166139 3897 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Il16-201ENSMUST00000001792 5260 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ube4bQ9ES00 Pex7-201ENSMUST00000020182 8099 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Lnpk-203ENSMUST00000111993 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Copa-206ENSMUST00000135192 4622 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Hacl1-214ENSMUST00000167175 1739 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Gm26704-201ENSMUST00000181362 2901 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Tsr2-202ENSMUST00000112683 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 BC017643-202ENSMUST00000106115 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Sntg1-207ENSMUST00000140295 4887 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Zfp469-202ENSMUST00000187142 3082 ntBASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Adgrf4-201ENSMUST00000024711 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Olfr130-203ENSMUST00000217390 5959 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Pitrm1-207ENSMUST00000222485 3906 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ube4bQ9ES00 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms