Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Chmp2aQ9DB34 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chmp2aQ9DB34 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Chmp2aQ9DB34 Wdr37-212ENSMUST00000176922 3780 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Chmp2aQ9DB34 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chmp2aQ9DB34 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chmp2aQ9DB34 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chmp2aQ9DB34 Gm20796-201ENSMUST00000180355 5838 ntBASIC11.02□□□□□ -0.64
Chmp2aQ9DB34 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chmp2aQ9DB34 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Chmp2aQ9DB34 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 Gm15554-201ENSMUST00000120406 913 ntBASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 Gm15620-201ENSMUST00000122949 270 ntBASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 Gm5881-201ENSMUST00000204737 367 ntBASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 AC134601.2-201ENSMUST00000221071 130 ntBASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 AC154407.1-201ENSMUST00000226777 526 ntBASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 AC108416.1-201ENSMUST00000228755 1558 ntBASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 Gm43052-201ENSMUST00000201451 1628 ntBASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Chmp2aQ9DB34 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Gm25880-201ENSMUST00000104331 132 ntBASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Gm12947-201ENSMUST00000116114 420 ntBASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Gm15031-201ENSMUST00000121341 210 ntBASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Gm14113-201ENSMUST00000121399 976 ntBASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Gm11993-201ENSMUST00000121861 820 ntBASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Gm25226-201ENSMUST00000158198 123 ntBASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Gm18463-201ENSMUST00000207258 474 ntBASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Gm18460-201ENSMUST00000208088 464 ntBASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Mir194-2-201ENSMUST00000083648 86 ntBASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Chmp2aQ9DB34 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Chmp2aQ9DB34 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Chmp2aQ9DB34 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp2aQ9DB34 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp2aQ9DB34 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Chmp2aQ9DB34 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC11□□□□□ -0.65
Chmp2aQ9DB34 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Chmp2aQ9DB34 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Chmp2aQ9DB34 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Chmp2aQ9DB34 Ephb4-202ENSMUST00000111054 3784 ntTSL 5 BASIC11□□□□□ -0.65
Chmp2aQ9DB34 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11□□□□□ -0.65
Chmp2aQ9DB34 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11□□□□□ -0.65
Chmp2aQ9DB34 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms