Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Gtf3c6Q9D8P7 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gtf3c6Q9D8P7 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gtf3c6Q9D8P7 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gtf3c6Q9D8P7 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gtf3c6Q9D8P7 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.53□□□□□ -0.56
Gtf3c6Q9D8P7 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gtf3c6Q9D8P7 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Gtf3c6Q9D8P7 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.53□□□□□ -0.56
Gtf3c6Q9D8P7 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gtf3c6Q9D8P7 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gtf3c6Q9D8P7 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gtf3c6Q9D8P7 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gtf3c6Q9D8P7 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gtf3c6Q9D8P7 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC11.53□□□□□ -0.56
Gtf3c6Q9D8P7 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.53□□□□□ -0.56
Gtf3c6Q9D8P7 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gtf3c6Q9D8P7 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gtf3c6Q9D8P7 Sorbs2-228ENSMUST00000153798 2667 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gtf3c6Q9D8P7 Inpp5k-201ENSMUST00000006286 2679 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gtf3c6Q9D8P7 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Gtf3c6Q9D8P7 Gp1ba-201ENSMUST00000055184 2710 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Gtf3c6Q9D8P7 Bfar-202ENSMUST00000069281 2456 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Gtf3c6Q9D8P7 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Gtf3c6Q9D8P7 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Gtf3c6Q9D8P7 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Gtf3c6Q9D8P7 Eno4-201ENSMUST00000054280 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Gtf3c6Q9D8P7 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 B430010I23Rik-201ENSMUST00000123703 2349 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Slc38a2-201ENSMUST00000023099 4626 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Gm44093-201ENSMUST00000204381 1802 ntBASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Gm5834-201ENSMUST00000126680 1026 ntBASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Gm23617-201ENSMUST00000175410 95 ntBASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Gm19459-201ENSMUST00000176240 835 ntBASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Gm37694-201ENSMUST00000191696 2133 ntBASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Gm43947-201ENSMUST00000203019 959 ntBASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 AC115304.2-201ENSMUST00000226399 332 ntBASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Gm45124-201ENSMUST00000206723 2755 ntBASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Nup107-201ENSMUST00000064848 3114 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Trpv2-201ENSMUST00000018651 2909 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Zfp114-201ENSMUST00000086010 3332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 AA474408-201ENSMUST00000098110 3339 ntBASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Gtf3c6Q9D8P7 Gm37633-201ENSMUST00000192858 2700 ntBASIC11.51□□□□□ -0.57
Gtf3c6Q9D8P7 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Gtf3c6Q9D8P7 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gtf3c6Q9D8P7 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gtf3c6Q9D8P7 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC11.51□□□□□ -0.57
Gtf3c6Q9D8P7 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gtf3c6Q9D8P7 Zfp169-201ENSMUST00000110110 2196 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Gtf3c6Q9D8P7 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gtf3c6Q9D8P7 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gtf3c6Q9D8P7 Gm10408-201ENSMUST00000096168 1512 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Gtf3c6Q9D8P7 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gtf3c6Q9D8P7 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
Gtf3c6Q9D8P7 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Gtf3c6Q9D8P7 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC11.51□□□□□ -0.57
Gtf3c6Q9D8P7 Gm28370-201ENSMUST00000185303 3375 ntTSL 5 BASIC11.51□□□□□ -0.57
Gtf3c6Q9D8P7 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gtf3c6Q9D8P7 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Gtf3c6Q9D8P7 Mir453-201ENSMUST00000104732 82 ntBASIC11.51□□□□□ -0.57
Gtf3c6Q9D8P7 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Gtf3c6Q9D8P7 Gm12616-201ENSMUST00000118594 382 ntBASIC11.51□□□□□ -0.57
Gtf3c6Q9D8P7 Gm12791-201ENSMUST00000120788 655 ntBASIC11.51□□□□□ -0.57
Gtf3c6Q9D8P7 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Gtf3c6Q9D8P7 Gm12624-201ENSMUST00000177615 382 ntBASIC11.51□□□□□ -0.57
Gtf3c6Q9D8P7 Gm12621-201ENSMUST00000177760 382 ntBASIC11.51□□□□□ -0.57
Gtf3c6Q9D8P7 Gm12615-201ENSMUST00000177970 382 ntBASIC11.51□□□□□ -0.57
Gtf3c6Q9D8P7 Gm12622-201ENSMUST00000177975 382 ntBASIC11.51□□□□□ -0.57
Gtf3c6Q9D8P7 Gm12627-201ENSMUST00000178412 382 ntBASIC11.51□□□□□ -0.57
Gtf3c6Q9D8P7 Gm12625-201ENSMUST00000179122 382 ntBASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms