Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC10.26□□□□□ -0.77
Otud1Q9CUB6 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Asb4-202ENSMUST00000183358 1143 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Gm7255-201ENSMUST00000187371 908 ntBASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Gm8869-201ENSMUST00000195222 947 ntBASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Gm42710-201ENSMUST00000200608 985 ntBASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Gm42964-201ENSMUST00000202965 382 ntBASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Gm43969-201ENSMUST00000204833 535 ntBASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Gm44760-201ENSMUST00000206375 1173 ntBASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Gm44647-201ENSMUST00000207402 428 ntBASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 AC102847.1-202ENSMUST00000226313 1245 ntBASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 CT030652.1-201ENSMUST00000227377 1235 ntBASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Vmn1r210-201ENSMUST00000072044 921 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC10.26□□□□□ -0.77
Otud1Q9CUB6 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Gm7405-201ENSMUST00000121476 1337 ntBASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Gm44897-201ENSMUST00000206187 1341 ntBASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Gm25507-201ENSMUST00000116981 144 ntBASIC10.25□□□□□ -0.77
Otud1Q9CUB6 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Gm6918-201ENSMUST00000167622 1222 ntBASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Gm20414-201ENSMUST00000172918 646 ntBASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Gm24328-201ENSMUST00000175104 67 ntBASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Gm20914-202ENSMUST00000188887 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Gm43097-201ENSMUST00000196867 151 ntBASIC10.25□□□□□ -0.77
Otud1Q9CUB6 AC124457.1-201ENSMUST00000198845 120 ntBASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Reg2-201ENSMUST00000023906 698 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Otud1Q9CUB6 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Otud1Q9CUB6 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.24□□□□□ -0.77
Otud1Q9CUB6 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC10.24□□□□□ -0.77
Otud1Q9CUB6 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Otud1Q9CUB6 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Otud1Q9CUB6 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms