Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Gm25562-201ENSMUST00000104608 133 ntBASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Gm9133-201ENSMUST00000118289 540 ntBASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Gm15196-201ENSMUST00000121406 482 ntBASIC11.85□□□□□ -0.51
Smc1aQ9CU62 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Gm26272-201ENSMUST00000179241 132 ntBASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Gm42433-201ENSMUST00000196806 940 ntBASIC11.85□□□□□ -0.51
Smc1aQ9CU62 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Gm9353-201ENSMUST00000200472 604 ntBASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Gm44814-201ENSMUST00000207018 434 ntBASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 AC115304.2-201ENSMUST00000226399 332 ntBASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smc1aQ9CU62 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Gm21817-201ENSMUST00000178584 2583 ntBASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Mir671-201ENSMUST00000102432 98 ntBASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Olfml3-204ENSMUST00000169286 874 ntBASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Gm9102-201ENSMUST00000219250 465 ntBASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Gm40879-201ENSMUST00000220759 612 ntBASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Id2-203ENSMUST00000222667 958 ntBASIC11.84□□□□□ -0.51
Smc1aQ9CU62 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.84□□□□□ -0.51
Smc1aQ9CU62 AC142266.1-201ENSMUST00000228107 415 ntBASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.84□□□□□ -0.51
Smc1aQ9CU62 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Smc1aQ9CU62 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smc1aQ9CU62 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smc1aQ9CU62 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smc1aQ9CU62 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smc1aQ9CU62 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smc1aQ9CU62 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smc1aQ9CU62 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smc1aQ9CU62 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Smc1aQ9CU62 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC11.83□□□□□ -0.52
Smc1aQ9CU62 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smc1aQ9CU62 Gm44445-201ENSMUST00000204075 2683 ntBASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms