Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Cyp4x1-202ENSMUST00000106545 4187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Itga10-201ENSMUST00000029744 5044 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Snhg11-201ENSMUST00000109488 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 N4bp2-201ENSMUST00000087264 5308 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Gm4993-201ENSMUST00000118719 1174 ntBASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Gm5764-201ENSMUST00000118817 885 ntBASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Gm31274-201ENSMUST00000197356 229 ntBASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Gm44304-201ENSMUST00000200509 145 ntBASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Gm44605-201ENSMUST00000206892 949 ntBASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Gm45258-201ENSMUST00000210042 853 ntBASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 AC122367.1-201ENSMUST00000221978 1709 ntBASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 AC144938.1-201ENSMUST00000223994 2167 ntBASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim29Q8R2Q0 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Gm13351-201ENSMUST00000118087 414 ntBASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Gm15031-201ENSMUST00000121341 210 ntBASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Umodl1-203ENSMUST00000114555 5041 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Extl1-201ENSMUST00000030643 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Copa-206ENSMUST00000135192 4622 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Gm44062-201ENSMUST00000203312 4857 ntBASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim29Q8R2Q0 Gm45719-201ENSMUST00000207954 1662 ntBASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms