Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pabpn1Q8CCS6 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pabpn1Q8CCS6 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pabpn1Q8CCS6 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pabpn1Q8CCS6 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pabpn1Q8CCS6 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Pabpn1Q8CCS6 Papolg-202ENSMUST00000102863 2171 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 AC154517.2-201ENSMUST00000220829 2458 ntBASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 Gm37036-201ENSMUST00000192836 2506 ntBASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 Zfp42-201ENSMUST00000082120 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 Trdv2-1-201ENSMUST00000103677 345 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 Gm11662-201ENSMUST00000121389 1193 ntBASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 Gm43607-201ENSMUST00000199524 336 ntTSL 3 BASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 AC157650.1-201ENSMUST00000224582 610 ntBASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 Gpcpd1-201ENSMUST00000028822 3179 ntTSL 5 BASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 Gm11100-201ENSMUST00000112652 1951 ntTSL 5 BASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 Gm5535-201ENSMUST00000099292 1743 ntTSL 2 BASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 Eda2r-202ENSMUST00000113832 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pabpn1Q8CCS6 Tnfrsf22-204ENSMUST00000171066 1780 ntBASIC16.1■□□□□ 0.17
Pabpn1Q8CCS6 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pabpn1Q8CCS6 Acvr1-203ENSMUST00000112599 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pabpn1Q8CCS6 Eif3l-201ENSMUST00000040518 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pabpn1Q8CCS6 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC16.1■□□□□ 0.17
Pabpn1Q8CCS6 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pabpn1Q8CCS6 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pabpn1Q8CCS6 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pabpn1Q8CCS6 Banf2os-202ENSMUST00000145504 386 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pabpn1Q8CCS6 Gm22881-201ENSMUST00000157747 134 ntBASIC16.1■□□□□ 0.17
Pabpn1Q8CCS6 Ang-202ENSMUST00000171688 728 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pabpn1Q8CCS6 Gm5857-201ENSMUST00000198953 493 ntBASIC16.1■□□□□ 0.17
Pabpn1Q8CCS6 Gm45134-201ENSMUST00000206046 1189 ntBASIC16.1■□□□□ 0.17
Pabpn1Q8CCS6 AC154548.2-201ENSMUST00000224621 469 ntBASIC16.1■□□□□ 0.17
Pabpn1Q8CCS6 Gm23405-201ENSMUST00000082542 160 ntBASIC16.1■□□□□ 0.17
Pabpn1Q8CCS6 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pabpn1Q8CCS6 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pabpn1Q8CCS6 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pabpn1Q8CCS6 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pabpn1Q8CCS6 6330415B21Rik-201ENSMUST00000204215 2200 ntBASIC16.1■□□□□ 0.17
Pabpn1Q8CCS6 Gm14705-201ENSMUST00000154109 1824 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pabpn1Q8CCS6 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pabpn1Q8CCS6 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pabpn1Q8CCS6 Eef1g-201ENSMUST00000052248 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pabpn1Q8CCS6 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pabpn1Q8CCS6 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Pabpn1Q8CCS6 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Mfap5-202ENSMUST00000118626 748 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Gm11199-201ENSMUST00000118691 507 ntBASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 4930455G09Rik-201ENSMUST00000126231 630 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Gm23985-201ENSMUST00000157140 124 ntBASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 5730435O14Rik-202ENSMUST00000170047 617 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Gm5561-201ENSMUST00000178932 480 ntBASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Ms4a10-203ENSMUST00000191343 862 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Rab38-202ENSMUST00000208478 579 ntTSL 3 BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Smim4-201ENSMUST00000049732 311 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Ms4a10-201ENSMUST00000072748 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Gm10080-201ENSMUST00000075585 438 ntBASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Hba-a1-201ENSMUST00000093209 699 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 AC135083.1-201ENSMUST00000227773 1331 ntBASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Creb3l4-202ENSMUST00000107369 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Ribc1-201ENSMUST00000026288 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pabpn1Q8CCS6 Il15ra-205ENSMUST00000114833 1607 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pabpn1Q8CCS6 Gm44831-201ENSMUST00000208469 2989 ntBASIC16.08■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms