Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Clgn-201ENSMUST00000002259 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Tnfaip8-212ENSMUST00000179937 2385 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Gm14234-201ENSMUST00000119539 845 ntBASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Gm8723-201ENSMUST00000166076 820 ntBASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Gm8701-201ENSMUST00000169259 874 ntBASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Gm8492-201ENSMUST00000182375 987 ntBASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Gm6069-201ENSMUST00000196501 463 ntBASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Gm43912-201ENSMUST00000204352 538 ntBASIC10.86□□□□□ -0.67
Trub1Q8C0D0 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Gm25514-201ENSMUST00000083860 135 ntBASIC10.86□□□□□ -0.67
Trub1Q8C0D0 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Chrm5-201ENSMUST00000099589 1599 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trub1Q8C0D0 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Gm19557-201ENSMUST00000182109 2765 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 AC151836.1-201ENSMUST00000228730 1637 ntBASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC10.85□□□□□ -0.67
Trub1Q8C0D0 1700001J04Rik-202ENSMUST00000154037 743 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 n-R5s130-201ENSMUST00000178128 119 ntBASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Gm24312-201ENSMUST00000178677 119 ntBASIC10.85□□□□□ -0.67
Trub1Q8C0D0 n-R5s106-201ENSMUST00000179060 119 ntBASIC10.85□□□□□ -0.67
Trub1Q8C0D0 n-R5s118-201ENSMUST00000179887 119 ntBASIC10.85□□□□□ -0.67
Trub1Q8C0D0 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Gm26943-201ENSMUST00000182295 957 ntBASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Gm28324-201ENSMUST00000187913 264 ntBASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Gm5130-201ENSMUST00000210233 959 ntBASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Papss1-206ENSMUST00000200527 2811 ntTSL 5 BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Gm42974-201ENSMUST00000199556 2654 ntBASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Gm15519-201ENSMUST00000120088 1566 ntBASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trub1Q8C0D0 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.85□□□□□ -0.67
Trub1Q8C0D0 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC10.85□□□□□ -0.67
Trub1Q8C0D0 Gm12381-201ENSMUST00000126314 2186 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Trub1Q8C0D0 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms