Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
GabpaQ00422 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC11.97□□□□□ -0.49
GabpaQ00422 Gm6727-201ENSMUST00000204102 1518 ntBASIC11.97□□□□□ -0.49
GabpaQ00422 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
GabpaQ00422 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
GabpaQ00422 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
GabpaQ00422 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC11.97□□□□□ -0.49
GabpaQ00422 A1cf-204ENSMUST00000224564 1432 ntBASIC11.97□□□□□ -0.49
GabpaQ00422 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
GabpaQ00422 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
GabpaQ00422 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
GabpaQ00422 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
GabpaQ00422 Gm6755-201ENSMUST00000100598 864 ntBASIC11.97□□□□□ -0.49
GabpaQ00422 Gm6740-201ENSMUST00000100617 864 ntBASIC11.97□□□□□ -0.49
GabpaQ00422 Gm13426-201ENSMUST00000117887 795 ntBASIC11.97□□□□□ -0.49
GabpaQ00422 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
GabpaQ00422 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC11.97□□□□□ -0.49
GabpaQ00422 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC11.97□□□□□ -0.49
GabpaQ00422 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC11.97□□□□□ -0.49
GabpaQ00422 Gm8226-201ENSMUST00000190511 798 ntBASIC11.97□□□□□ -0.49
GabpaQ00422 Gm37597-201ENSMUST00000191853 382 ntBASIC11.97□□□□□ -0.49
GabpaQ00422 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
GabpaQ00422 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC11.97□□□□□ -0.49
GabpaQ00422 Gm5040-201ENSMUST00000218609 800 ntBASIC11.97□□□□□ -0.49
GabpaQ00422 Gm29689-201ENSMUST00000221076 589 ntBASIC11.97□□□□□ -0.49
GabpaQ00422 AC134860.5-201ENSMUST00000225071 1249 ntBASIC11.97□□□□□ -0.49
GabpaQ00422 AC154477.1-201ENSMUST00000226515 773 ntBASIC11.97□□□□□ -0.49
GabpaQ00422 AC103672.1-201ENSMUST00000227502 365 ntBASIC11.97□□□□□ -0.49
GabpaQ00422 AC137842.2-201ENSMUST00000227734 797 ntBASIC11.97□□□□□ -0.49
GabpaQ00422 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
GabpaQ00422 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
GabpaQ00422 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
GabpaQ00422 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
GabpaQ00422 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
GabpaQ00422 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
GabpaQ00422 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
GabpaQ00422 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
GabpaQ00422 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.97□□□□□ -0.49
GabpaQ00422 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
GabpaQ00422 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
GabpaQ00422 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
GabpaQ00422 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.97□□□□□ -0.49
GabpaQ00422 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
GabpaQ00422 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
GabpaQ00422 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.96□□□□□ -0.49
GabpaQ00422 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
GabpaQ00422 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
GabpaQ00422 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
GabpaQ00422 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.96□□□□□ -0.49
GabpaQ00422 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
GabpaQ00422 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
GabpaQ00422 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
GabpaQ00422 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
GabpaQ00422 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
GabpaQ00422 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC11.96□□□□□ -0.49
GabpaQ00422 Gm15636-201ENSMUST00000119205 668 ntBASIC11.96□□□□□ -0.49
GabpaQ00422 Gm16305-201ENSMUST00000140747 556 ntBASIC11.96□□□□□ -0.49
GabpaQ00422 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.96□□□□□ -0.49
GabpaQ00422 Gm17799-201ENSMUST00000183270 667 ntBASIC11.96□□□□□ -0.49
GabpaQ00422 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
GabpaQ00422 Gm28179-201ENSMUST00000188365 613 ntBASIC11.96□□□□□ -0.49
GabpaQ00422 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
GabpaQ00422 Gm37390-201ENSMUST00000192452 872 ntBASIC11.96□□□□□ -0.49
GabpaQ00422 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC11.96□□□□□ -0.49
GabpaQ00422 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC11.96□□□□□ -0.49
GabpaQ00422 Gm18596-201ENSMUST00000218133 843 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
GabpaQ00422 Gm19090-201ENSMUST00000218187 774 ntBASIC11.96□□□□□ -0.49
GabpaQ00422 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
GabpaQ00422 Gm9701-201ENSMUST00000077976 427 ntBASIC11.96□□□□□ -0.49
GabpaQ00422 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
GabpaQ00422 Gm4778-201ENSMUST00000098878 1098 ntBASIC11.96□□□□□ -0.49
GabpaQ00422 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC11.96□□□□□ -0.49
GabpaQ00422 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
GabpaQ00422 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
GabpaQ00422 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
GabpaQ00422 Gm45041-201ENSMUST00000207366 3108 ntBASIC11.96□□□□□ -0.5
GabpaQ00422 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.96□□□□□ -0.5
GabpaQ00422 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
GabpaQ00422 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
GabpaQ00422 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
GabpaQ00422 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
GabpaQ00422 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
GabpaQ00422 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
GabpaQ00422 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
GabpaQ00422 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
GabpaQ00422 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
GabpaQ00422 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
GabpaQ00422 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.95□□□□□ -0.5
GabpaQ00422 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC11.95□□□□□ -0.5
GabpaQ00422 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC11.95□□□□□ -0.5
GabpaQ00422 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
GabpaQ00422 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
GabpaQ00422 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
GabpaQ00422 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
GabpaQ00422 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
GabpaQ00422 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
GabpaQ00422 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
GabpaQ00422 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
GabpaQ00422 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
GabpaQ00422 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms