Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc1P97496 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc1P97496 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC13.25□□□□□ -0.29
Smarcc1P97496 Gm38227-201ENSMUST00000193036 1602 ntBASIC13.25□□□□□ -0.29
Smarcc1P97496 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC13.25□□□□□ -0.29
Smarcc1P97496 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc1P97496 Gm43625-201ENSMUST00000199177 1539 ntBASIC13.25□□□□□ -0.29
Smarcc1P97496 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc1P97496 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Smarcc1P97496 Gm43931-201ENSMUST00000204817 2870 ntBASIC13.25□□□□□ -0.29
Smarcc1P97496 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC13.25□□□□□ -0.29
Smarcc1P97496 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc1P97496 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc1P97496 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc1P97496 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc1P97496 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc1P97496 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc1P97496 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc1P97496 Gm14853-201ENSMUST00000116081 549 ntBASIC13.25□□□□□ -0.29
Smarcc1P97496 Gm15702-201ENSMUST00000119680 444 ntBASIC13.25□□□□□ -0.29
Smarcc1P97496 Gm12420-201ENSMUST00000119869 1048 ntBASIC13.25□□□□□ -0.29
Smarcc1P97496 Gm12570-201ENSMUST00000122047 1030 ntBASIC13.25□□□□□ -0.29
Smarcc1P97496 1700112J05Rik-201ENSMUST00000129353 793 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc1P97496 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc1P97496 Gm3687-201ENSMUST00000161710 460 ntBASIC13.25□□□□□ -0.29
Smarcc1P97496 Rergl-201ENSMUST00000170650 958 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc1P97496 Gm25694-201ENSMUST00000175448 282 ntBASIC13.25□□□□□ -0.29
Smarcc1P97496 Gm23521-201ENSMUST00000177845 110 ntBASIC13.25□□□□□ -0.29
Smarcc1P97496 Gm7251-201ENSMUST00000182661 1009 ntBASIC13.25□□□□□ -0.29
Smarcc1P97496 Gm8625-201ENSMUST00000194185 1077 ntBASIC13.25□□□□□ -0.29
Smarcc1P97496 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC13.25□□□□□ -0.29
Smarcc1P97496 Gm36980-201ENSMUST00000195643 622 ntBASIC13.25□□□□□ -0.29
Smarcc1P97496 Gm5845-201ENSMUST00000195812 796 ntBASIC13.25□□□□□ -0.29
Smarcc1P97496 Gm9273-201ENSMUST00000200606 715 ntBASIC13.25□□□□□ -0.29
Smarcc1P97496 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC13.25□□□□□ -0.29
Smarcc1P97496 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC13.25□□□□□ -0.29
Smarcc1P97496 Olfr578-201ENSMUST00000056235 942 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Smarcc1P97496 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc1P97496 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc1P97496 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc1P97496 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc1P97496 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc1P97496 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc1P97496 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc1P97496 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcc1P97496 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Smarcc1P97496 Gm2128-201ENSMUST00000108009 2560 ntBASIC13.25□□□□□ -0.29
Smarcc1P97496 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc1P97496 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Smarcc1P97496 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc1P97496 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Smarcc1P97496 Olfr543-202ENSMUST00000219647 1456 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Smarcc1P97496 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc1P97496 Gm38220-201ENSMUST00000195774 1447 ntBASIC13.24□□□□□ -0.29
Smarcc1P97496 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc1P97496 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc1P97496 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc1P97496 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc1P97496 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Smarcc1P97496 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc1P97496 Gstm6-204ENSMUST00000106684 1179 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc1P97496 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Smarcc1P97496 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc1P97496 Fam220-ps-201ENSMUST00000116535 783 ntBASIC13.24□□□□□ -0.29
Smarcc1P97496 Gm8809-201ENSMUST00000119367 743 ntBASIC13.24□□□□□ -0.29
Smarcc1P97496 Banf2os-201ENSMUST00000124061 771 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc1P97496 Gm16193-201ENSMUST00000125903 778 ntTSL 3 BASIC13.24□□□□□ -0.29
Smarcc1P97496 D430040D24Rik-201ENSMUST00000149224 910 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc1P97496 Fam240a-201ENSMUST00000177678 499 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Smarcc1P97496 E330020D12Rik-203ENSMUST00000188717 766 ntTSL 2 BASIC13.24□□□□□ -0.29
Smarcc1P97496 Gm2316-201ENSMUST00000190613 921 ntBASIC13.24□□□□□ -0.29
Smarcc1P97496 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC13.24□□□□□ -0.29
Smarcc1P97496 Gm19566-201ENSMUST00000199576 610 ntBASIC13.24□□□□□ -0.29
Smarcc1P97496 Gm6439-201ENSMUST00000199849 862 ntBASIC13.24□□□□□ -0.29
Smarcc1P97496 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Smarcc1P97496 Gm45846-201ENSMUST00000211170 446 ntTSL 2 BASIC13.24□□□□□ -0.29
Smarcc1P97496 Gm5194-201ENSMUST00000221457 742 ntBASIC13.24□□□□□ -0.29
Smarcc1P97496 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC13.24□□□□□ -0.29
Smarcc1P97496 AC154431.1-201ENSMUST00000224910 880 ntBASIC13.24□□□□□ -0.29
Smarcc1P97496 CT025618.1-201ENSMUST00000227409 1279 ntBASIC13.24□□□□□ -0.29
Smarcc1P97496 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc1P97496 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC13.24□□□□□ -0.29
Smarcc1P97496 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc1P97496 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc1P97496 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc1P97496 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc1P97496 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc1P97496 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC13.24□□□□□ -0.29
Smarcc1P97496 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc1P97496 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc1P97496 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc1P97496 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Smarcc1P97496 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc1P97496 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc1P97496 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC13.23□□□□□ -0.29
Smarcc1P97496 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc1P97496 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc1P97496 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc1P97496 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC13.23□□□□□ -0.29
Smarcc1P97496 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms