Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
H3f3aP84244 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
H3f3aP84244 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC9.42□□□□□ -0.9
H3f3aP84244 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Gm37160-201ENSMUST00000193081 1689 ntBASIC9.42□□□□□ -0.9
H3f3aP84244 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.42□□□□□ -0.9
H3f3aP84244 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC9.42□□□□□ -0.9
H3f3aP84244 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
H3f3aP84244 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
H3f3aP84244 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
H3f3aP84244 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
H3f3aP84244 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Gm11919-201ENSMUST00000117609 721 ntBASIC9.42□□□□□ -0.9
H3f3aP84244 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
H3f3aP84244 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC9.42□□□□□ -0.9
H3f3aP84244 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
H3f3aP84244 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC9.42□□□□□ -0.9
H3f3aP84244 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
H3f3aP84244 Rn7s6-201ENSMUST00000175005 291 ntBASIC9.42□□□□□ -0.9
H3f3aP84244 Gm3671-201ENSMUST00000182463 1007 ntBASIC9.42□□□□□ -0.9
H3f3aP84244 Gm5267-201ENSMUST00000191574 1045 ntBASIC9.42□□□□□ -0.9
H3f3aP84244 Gm4430-202ENSMUST00000193902 1041 ntBASIC9.42□□□□□ -0.9
H3f3aP84244 Gm43564-201ENSMUST00000196185 211 ntBASIC9.42□□□□□ -0.9
H3f3aP84244 Gm43460-201ENSMUST00000202491 1057 ntBASIC9.42□□□□□ -0.9
H3f3aP84244 Gm18463-201ENSMUST00000207258 474 ntBASIC9.42□□□□□ -0.9
H3f3aP84244 Gm18460-201ENSMUST00000208088 464 ntBASIC9.42□□□□□ -0.9
H3f3aP84244 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Gm5189-201ENSMUST00000221796 261 ntBASIC9.42□□□□□ -0.9
H3f3aP84244 Gm26782-203ENSMUST00000227103 751 ntBASIC9.42□□□□□ -0.9
H3f3aP84244 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC9.42□□□□□ -0.9
H3f3aP84244 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC9.42□□□□□ -0.9
H3f3aP84244 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC9.42□□□□□ -0.9
H3f3aP84244 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
H3f3aP84244 AC151836.1-201ENSMUST00000228730 1637 ntBASIC9.42□□□□□ -0.9
H3f3aP84244 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
H3f3aP84244 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
H3f3aP84244 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
H3f3aP84244 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
H3f3aP84244 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
H3f3aP84244 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
H3f3aP84244 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
H3f3aP84244 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC9.41□□□□□ -0.9
H3f3aP84244 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H3f3aP84244 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
H3f3aP84244 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
H3f3aP84244 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
H3f3aP84244 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
H3f3aP84244 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
H3f3aP84244 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
H3f3aP84244 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
H3f3aP84244 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H3f3aP84244 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
H3f3aP84244 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC9.41□□□□□ -0.9
H3f3aP84244 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC9.41□□□□□ -0.9
H3f3aP84244 Gm14006-201ENSMUST00000122132 981 ntBASIC9.41□□□□□ -0.9
H3f3aP84244 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC9.41□□□□□ -0.9
H3f3aP84244 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
H3f3aP84244 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
H3f3aP84244 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC9.41□□□□□ -0.9
H3f3aP84244 Gm44640-201ENSMUST00000206894 247 ntBASIC9.41□□□□□ -0.9
H3f3aP84244 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
H3f3aP84244 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms