Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm6939-201ENSMUST00000122029 864 ntBASIC10.86□□□□□ -0.67
Ybx1P62960 Gm7805-201ENSMUST00000154348 448 ntBASIC10.86□□□□□ -0.67
Ybx1P62960 Gm25394-201ENSMUST00000157338 133 ntBASIC10.86□□□□□ -0.67
Ybx1P62960 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Ybx1P62960 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC10.86□□□□□ -0.67
Ybx1P62960 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ybx1P62960 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ybx1P62960 Gm26943-201ENSMUST00000182295 957 ntBASIC10.86□□□□□ -0.67
Ybx1P62960 Gm6216-201ENSMUST00000182390 687 ntBASIC10.86□□□□□ -0.67
Ybx1P62960 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.86□□□□□ -0.67
Ybx1P62960 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Ybx1P62960 Gm5543-201ENSMUST00000193329 1091 ntBASIC10.86□□□□□ -0.67
Ybx1P62960 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC10.86□□□□□ -0.67
Ybx1P62960 Gm44917-201ENSMUST00000208798 520 ntBASIC10.86□□□□□ -0.67
Ybx1P62960 Gm18164-201ENSMUST00000213769 927 ntBASIC10.86□□□□□ -0.67
Ybx1P62960 Gm18166-201ENSMUST00000215557 927 ntBASIC10.86□□□□□ -0.67
Ybx1P62960 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC10.86□□□□□ -0.67
Ybx1P62960 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Ybx1P62960 Gm25125-201ENSMUST00000083340 136 ntBASIC10.86□□□□□ -0.67
Ybx1P62960 Mir194-2-201ENSMUST00000083648 86 ntBASIC10.86□□□□□ -0.67
Ybx1P62960 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ybx1P62960 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ybx1P62960 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ybx1P62960 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Ybx1P62960 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ybx1P62960 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ybx1P62960 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ybx1P62960 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ybx1P62960 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.86□□□□□ -0.67
Ybx1P62960 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.86□□□□□ -0.67
Ybx1P62960 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ybx1P62960 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Ybx1P62960 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ybx1P62960 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.85□□□□□ -0.67
Ybx1P62960 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
Ybx1P62960 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Ybx1P62960 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Gm13120-201ENSMUST00000117343 1446 ntBASIC10.85□□□□□ -0.67
Ybx1P62960 Gm6783-201ENSMUST00000120916 1437 ntBASIC10.85□□□□□ -0.67
Ybx1P62960 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC10.85□□□□□ -0.67
Ybx1P62960 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.85□□□□□ -0.67
Ybx1P62960 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.85□□□□□ -0.67
Ybx1P62960 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.85□□□□□ -0.67
Ybx1P62960 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Gm12736-201ENSMUST00000119330 236 ntBASIC10.85□□□□□ -0.67
Ybx1P62960 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC10.85□□□□□ -0.67
Ybx1P62960 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC10.85□□□□□ -0.67
Ybx1P62960 Gm37597-201ENSMUST00000191853 382 ntBASIC10.85□□□□□ -0.67
Ybx1P62960 Gm43117-201ENSMUST00000198531 379 ntBASIC10.85□□□□□ -0.67
Ybx1P62960 BB187690-201ENSMUST00000198619 1176 ntBASIC10.85□□□□□ -0.67
Ybx1P62960 Gm42588-201ENSMUST00000200538 1297 ntBASIC10.85□□□□□ -0.67
Ybx1P62960 Gm42710-201ENSMUST00000200608 985 ntBASIC10.85□□□□□ -0.67
Ybx1P62960 Gm45090-201ENSMUST00000208775 1148 ntBASIC10.85□□□□□ -0.67
Ybx1P62960 Gm2716-201ENSMUST00000212350 643 ntBASIC10.85□□□□□ -0.67
Ybx1P62960 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC10.85□□□□□ -0.67
Ybx1P62960 AC139155.1-201ENSMUST00000226043 444 ntBASIC10.85□□□□□ -0.67
Ybx1P62960 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC10.85□□□□□ -0.67
Ybx1P62960 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Ybx1P62960 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC10.85□□□□□ -0.67
Ybx1P62960 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ybx1P62960 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Ybx1P62960 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ybx1P62960 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC10.84□□□□□ -0.67
Ybx1P62960 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.84□□□□□ -0.67
Ybx1P62960 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ybx1P62960 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ybx1P62960 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.84□□□□□ -0.67
Ybx1P62960 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ybx1P62960 Gm13192-201ENSMUST00000101199 208 ntBASIC10.84□□□□□ -0.67
Ybx1P62960 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Ybx1P62960 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms