Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atxn1P54254 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.57□□□□□ -0.72
Atxn1P54254 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Atxn1P54254 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Atxn1P54254 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atxn1P54254 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atxn1P54254 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Atxn1P54254 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Atxn1P54254 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Atxn1P54254 Gm37160-201ENSMUST00000193081 1689 ntBASIC10.57□□□□□ -0.72
Atxn1P54254 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Atxn1P54254 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC10.56□□□□□ -0.72
Atxn1P54254 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Tmem56-207ENSMUST00000155309 2230 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Atxn1P54254 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC10.56□□□□□ -0.72
Atxn1P54254 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC10.56□□□□□ -0.72
Atxn1P54254 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.56□□□□□ -0.72
Atxn1P54254 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC10.56□□□□□ -0.72
Atxn1P54254 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Atxn1P54254 Gm14148-201ENSMUST00000122433 1008 ntBASIC10.56□□□□□ -0.72
Atxn1P54254 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Gm27833-201ENSMUST00000184285 124 ntBASIC10.56□□□□□ -0.72
Atxn1P54254 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.56□□□□□ -0.72
Atxn1P54254 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC10.56□□□□□ -0.72
Atxn1P54254 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC10.56□□□□□ -0.72
Atxn1P54254 Gm6439-201ENSMUST00000199849 862 ntBASIC10.56□□□□□ -0.72
Atxn1P54254 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.56□□□□□ -0.72
Atxn1P54254 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC10.56□□□□□ -0.72
Atxn1P54254 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC10.56□□□□□ -0.72
Atxn1P54254 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Atxn1P54254 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Atxn1P54254 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.56□□□□□ -0.72
Atxn1P54254 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Atxn1P54254 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.56□□□□□ -0.72
Atxn1P54254 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Atxn1P54254 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Atxn1P54254 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Atxn1P54254 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.55□□□□□ -0.72
Atxn1P54254 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
Atxn1P54254 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.55□□□□□ -0.72
Atxn1P54254 Btrc-209ENSMUST00000224478 2194 ntBASIC10.55□□□□□ -0.72
Atxn1P54254 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Atxn1P54254 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Atxn1P54254 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC10.55□□□□□ -0.72
Atxn1P54254 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.55□□□□□ -0.72
Atxn1P54254 Gm5944-201ENSMUST00000118182 1001 ntBASIC10.55□□□□□ -0.72
Atxn1P54254 Gm15476-201ENSMUST00000118247 1191 ntBASIC10.55□□□□□ -0.72
Atxn1P54254 Gm14633-201ENSMUST00000121152 470 ntBASIC10.55□□□□□ -0.72
Atxn1P54254 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC10.55□□□□□ -0.72
Atxn1P54254 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC10.55□□□□□ -0.72
Atxn1P54254 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Atxn1P54254 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC10.55□□□□□ -0.72
Atxn1P54254 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms