Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Sox1P53783 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Sox1P53783 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Sox1P53783 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Sox1P53783 Amn1-202ENSMUST00000111535 1457 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Sox1P53783 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox1P53783 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Sox1P53783 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox1P53783 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox1P53783 Gm5910-201ENSMUST00000211819 1746 ntBASIC10.87□□□□□ -0.67
Sox1P53783 Bcl2-202ENSMUST00000189999 2841 ntBASIC10.87□□□□□ -0.67
Sox1P53783 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox1P53783 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox1P53783 Gm42833-201ENSMUST00000196019 2124 ntBASIC10.87□□□□□ -0.67
Sox1P53783 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.87□□□□□ -0.67
Sox1P53783 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox1P53783 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Sox1P53783 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox1P53783 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.87□□□□□ -0.67
Sox1P53783 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC10.87□□□□□ -0.67
Sox1P53783 Rhox4a-201ENSMUST00000115194 925 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox1P53783 Gm12464-201ENSMUST00000121385 1016 ntBASIC10.87□□□□□ -0.67
Sox1P53783 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Sox1P53783 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox1P53783 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Sox1P53783 Rsrc1-209ENSMUST00000162693 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox1P53783 Psd3-211ENSMUST00000178529 828 ntTSL 5 BASIC10.87□□□□□ -0.67
Sox1P53783 Gm6463-201ENSMUST00000182090 966 ntBASIC10.87□□□□□ -0.67
Sox1P53783 Gm5710-201ENSMUST00000183020 995 ntBASIC10.87□□□□□ -0.67
Sox1P53783 E330020D12Rik-203ENSMUST00000188717 766 ntTSL 2 BASIC10.87□□□□□ -0.67
Sox1P53783 Spata45-202ENSMUST00000192151 443 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Sox1P53783 Gm37629-201ENSMUST00000193635 1050 ntBASIC10.87□□□□□ -0.67
Sox1P53783 Lysmd4-203ENSMUST00000207757 631 ntAPPRIS ALT2 TSL 3 BASIC10.87□□□□□ -0.67
Sox1P53783 Gm9520-201ENSMUST00000209460 1253 ntBASIC10.87□□□□□ -0.67
Sox1P53783 Gm8162-201ENSMUST00000213951 665 ntBASIC10.87□□□□□ -0.67
Sox1P53783 Gm46189-201ENSMUST00000219395 644 ntTSL 3 BASIC10.87□□□□□ -0.67
Sox1P53783 Gm40578-202ENSMUST00000221429 920 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox1P53783 Gm8991-201ENSMUST00000073014 1075 ntBASIC10.87□□□□□ -0.67
Sox1P53783 Krtap9-1-201ENSMUST00000093936 1044 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sox1P53783 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox1P53783 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox1P53783 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox1P53783 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox1P53783 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox1P53783 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox1P53783 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox1P53783 Gm10754-202ENSMUST00000220233 1633 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox1P53783 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox1P53783 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Sox1P53783 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.87□□□□□ -0.67
Sox1P53783 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox1P53783 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Sox1P53783 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox1P53783 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.87□□□□□ -0.67
Sox1P53783 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox1P53783 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox1P53783 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox1P53783 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Sox1P53783 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox1P53783 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox1P53783 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sox1P53783 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox1P53783 Milr1-201ENSMUST00000086353 1348 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox1P53783 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox1P53783 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox1P53783 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox1P53783 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox1P53783 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.86□□□□□ -0.67
Sox1P53783 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox1P53783 Gm13120-201ENSMUST00000117343 1446 ntBASIC10.86□□□□□ -0.67
Sox1P53783 Gm13104-201ENSMUST00000119651 1446 ntBASIC10.86□□□□□ -0.67
Sox1P53783 Tbxas1-206ENSMUST00000162521 1427 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox1P53783 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Sox1P53783 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox1P53783 Gabarap-202ENSMUST00000108592 750 ntTSL 3 BASIC10.86□□□□□ -0.67
Sox1P53783 Ucma-202ENSMUST00000115010 847 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox1P53783 Gm14370-201ENSMUST00000122460 868 ntBASIC10.86□□□□□ -0.67
Sox1P53783 Gm15273-201ENSMUST00000142302 868 ntBASIC10.86□□□□□ -0.67
Sox1P53783 Gm7023-201ENSMUST00000147295 868 ntBASIC10.86□□□□□ -0.67
Sox1P53783 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC10.86□□□□□ -0.67
Sox1P53783 Gm3687-201ENSMUST00000161710 460 ntBASIC10.86□□□□□ -0.67
Sox1P53783 Olfr754-ps1-201ENSMUST00000173181 911 ntBASIC10.86□□□□□ -0.67
Sox1P53783 Gm14357-201ENSMUST00000178352 868 ntBASIC10.86□□□□□ -0.67
Sox1P53783 Gm14361-201ENSMUST00000178547 868 ntBASIC10.86□□□□□ -0.67
Sox1P53783 Gm14348-201ENSMUST00000179183 868 ntBASIC10.86□□□□□ -0.67
Sox1P53783 Gm6098-201ENSMUST00000180234 330 ntBASIC10.86□□□□□ -0.67
Sox1P53783 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox1P53783 5730420D15Rik-201ENSMUST00000181781 1182 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox1P53783 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC10.86□□□□□ -0.67
Sox1P53783 Gm38170-201ENSMUST00000195404 816 ntBASIC10.86□□□□□ -0.67
Sox1P53783 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.86□□□□□ -0.67
Sox1P53783 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sox1P53783 Gm45846-201ENSMUST00000211170 446 ntTSL 2 BASIC10.86□□□□□ -0.67
Sox1P53783 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC10.86□□□□□ -0.67
Sox1P53783 AC120406.1-201ENSMUST00000220362 482 ntBASIC10.86□□□□□ -0.67
Sox1P53783 AC154643.1-201ENSMUST00000225643 625 ntBASIC10.86□□□□□ -0.67
Sox1P53783 Gm10015-201ENSMUST00000072570 465 ntBASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms