Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LtbrP50284 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
LtbrP50284 Gm18382-201ENSMUST00000194394 582 ntBASIC12.76□□□□□ -0.37
LtbrP50284 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC12.76□□□□□ -0.37
LtbrP50284 Gm38349-201ENSMUST00000195732 462 ntBASIC12.76□□□□□ -0.37
LtbrP50284 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LtbrP50284 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC12.76□□□□□ -0.37
LtbrP50284 Gm8268-201ENSMUST00000209683 458 ntBASIC12.76□□□□□ -0.37
LtbrP50284 Gm45893-201ENSMUST00000211899 247 ntBASIC12.76□□□□□ -0.37
LtbrP50284 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.76□□□□□ -0.37
LtbrP50284 AC101205.2-201ENSMUST00000226206 715 ntBASIC12.76□□□□□ -0.37
LtbrP50284 AC115357.1-201ENSMUST00000227575 466 ntBASIC12.76□□□□□ -0.37
LtbrP50284 AC132918.1-201ENSMUST00000227877 925 ntBASIC12.76□□□□□ -0.37
LtbrP50284 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LtbrP50284 Krtap6-3-201ENSMUST00000079151 444 ntBASIC12.76□□□□□ -0.37
LtbrP50284 Gm17415-201ENSMUST00000096427 789 ntBASIC12.76□□□□□ -0.37
LtbrP50284 Gm43341-201ENSMUST00000200104 1308 ntBASIC12.76□□□□□ -0.37
LtbrP50284 Gm19210-201ENSMUST00000199562 1350 ntBASIC12.76□□□□□ -0.37
LtbrP50284 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LtbrP50284 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LtbrP50284 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LtbrP50284 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LtbrP50284 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC12.76□□□□□ -0.37
LtbrP50284 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
LtbrP50284 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LtbrP50284 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LtbrP50284 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.76□□□□□ -0.37
LtbrP50284 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
LtbrP50284 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
LtbrP50284 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LtbrP50284 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LtbrP50284 Gm9244-201ENSMUST00000056767 2129 ntBASIC12.76□□□□□ -0.37
LtbrP50284 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC12.76□□□□□ -0.37
LtbrP50284 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC12.76□□□□□ -0.37
LtbrP50284 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LtbrP50284 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
LtbrP50284 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LtbrP50284 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LtbrP50284 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
LtbrP50284 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LtbrP50284 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LtbrP50284 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LtbrP50284 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LtbrP50284 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LtbrP50284 Ighv13-1-201ENSMUST00000103480 294 ntBASIC12.75□□□□□ -0.37
LtbrP50284 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
LtbrP50284 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LtbrP50284 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LtbrP50284 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LtbrP50284 Mir1190-201ENSMUST00000116925 96 ntBASIC12.75□□□□□ -0.37
LtbrP50284 Gm14398-201ENSMUST00000117287 1073 ntBASIC12.75□□□□□ -0.37
LtbrP50284 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC12.75□□□□□ -0.37
LtbrP50284 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC12.75□□□□□ -0.37
LtbrP50284 Gm4917-201ENSMUST00000121452 650 ntBASIC12.75□□□□□ -0.37
LtbrP50284 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LtbrP50284 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LtbrP50284 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LtbrP50284 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LtbrP50284 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LtbrP50284 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
LtbrP50284 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LtbrP50284 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.75□□□□□ -0.37
LtbrP50284 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LtbrP50284 Gm6439-201ENSMUST00000199849 862 ntBASIC12.75□□□□□ -0.37
LtbrP50284 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.75□□□□□ -0.37
LtbrP50284 Gm44441-201ENSMUST00000203642 2475 ntBASIC12.75□□□□□ -0.37
LtbrP50284 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LtbrP50284 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC12.75□□□□□ -0.37
LtbrP50284 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC12.75□□□□□ -0.37
LtbrP50284 AC164429.1-201ENSMUST00000224210 518 ntBASIC12.75□□□□□ -0.37
LtbrP50284 AC163638.2-201ENSMUST00000224920 827 ntBASIC12.75□□□□□ -0.37
LtbrP50284 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LtbrP50284 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LtbrP50284 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
LtbrP50284 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LtbrP50284 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
LtbrP50284 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
LtbrP50284 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
LtbrP50284 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LtbrP50284 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LtbrP50284 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LtbrP50284 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.75□□□□□ -0.37
LtbrP50284 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.75□□□□□ -0.37
LtbrP50284 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LtbrP50284 Gm10652-201ENSMUST00000199790 2622 ntBASIC12.75□□□□□ -0.37
LtbrP50284 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LtbrP50284 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC12.74□□□□□ -0.37
LtbrP50284 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.74□□□□□ -0.37
LtbrP50284 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LtbrP50284 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LtbrP50284 Fxr1-202ENSMUST00000167354 1986 ntTSL 5 BASIC12.74□□□□□ -0.37
LtbrP50284 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LtbrP50284 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LtbrP50284 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LtbrP50284 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LtbrP50284 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LtbrP50284 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LtbrP50284 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LtbrP50284 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LtbrP50284 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms