Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Snora68-201ENSMUST00000104375 131 ntBASIC10.03□□□□□ -0.8
Nkx2-6P43688 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Gm16518-201ENSMUST00000117960 508 ntBASIC10.03□□□□□ -0.8
Nkx2-6P43688 Gm9166-201ENSMUST00000120293 561 ntBASIC10.03□□□□□ -0.8
Nkx2-6P43688 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC10.03□□□□□ -0.8
Nkx2-6P43688 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Gm13688-201ENSMUST00000121557 608 ntBASIC10.03□□□□□ -0.8
Nkx2-6P43688 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Gm22876-201ENSMUST00000175450 298 ntBASIC10.03□□□□□ -0.8
Nkx2-6P43688 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
Nkx2-6P43688 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Gm37688-201ENSMUST00000195195 465 ntBASIC10.03□□□□□ -0.8
Nkx2-6P43688 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Gm4930-201ENSMUST00000219926 1087 ntBASIC10.03□□□□□ -0.8
Nkx2-6P43688 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Nkx2-6P43688 AC154461.3-201ENSMUST00000224831 573 ntBASIC10.03□□□□□ -0.8
Nkx2-6P43688 AC105408.1-201ENSMUST00000227771 802 ntBASIC10.03□□□□□ -0.8
Nkx2-6P43688 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Gm4865-201ENSMUST00000196284 1309 ntBASIC10.03□□□□□ -0.8
Nkx2-6P43688 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Nkx2-6P43688 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Nkx2-6P43688 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Nkx2-6P43688 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Nkx2-6P43688 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Nkx2-6P43688 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-6P43688 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-6P43688 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Nkx2-6P43688 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-6P43688 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC10.02□□□□□ -0.81
Nkx2-6P43688 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-6P43688 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-6P43688 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC10.02□□□□□ -0.81
Nkx2-6P43688 Gm12950-201ENSMUST00000121683 417 ntBASIC10.02□□□□□ -0.81
Nkx2-6P43688 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-6P43688 Gm23582-201ENSMUST00000158530 139 ntBASIC10.02□□□□□ -0.81
Nkx2-6P43688 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC10.02□□□□□ -0.81
Nkx2-6P43688 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC10.02□□□□□ -0.81
Nkx2-6P43688 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-6P43688 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-6P43688 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC10.02□□□□□ -0.81
Nkx2-6P43688 Gm18123-201ENSMUST00000210874 822 ntBASIC10.02□□□□□ -0.81
Nkx2-6P43688 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC10.02□□□□□ -0.81
Nkx2-6P43688 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-6P43688 AC133496.1-201ENSMUST00000223891 743 ntBASIC10.02□□□□□ -0.81
Nkx2-6P43688 Gm5278-201ENSMUST00000055957 552 ntBASIC10.02□□□□□ -0.81
Nkx2-6P43688 Mir194-2-201ENSMUST00000083648 86 ntBASIC10.02□□□□□ -0.81
Nkx2-6P43688 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Nkx2-6P43688 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-6P43688 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.02□□□□□ -0.81
Nkx2-6P43688 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-6P43688 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-6P43688 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.02□□□□□ -0.81
Nkx2-6P43688 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC10.02□□□□□ -0.81
Nkx2-6P43688 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-6P43688 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-6P43688 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Nkx2-6P43688 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.02□□□□□ -0.81
Nkx2-6P43688 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Nkx2-6P43688 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-6P43688 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms