Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Fam186b-201ENSMUST00000109100 3187 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Nedd8P29595 Gm15163-201ENSMUST00000120749 1302 ntBASIC9.61□□□□□ -0.87
Nedd8P29595 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nedd8P29595 Il7-204ENSMUST00000194184 1785 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nedd8P29595 Gm43318-201ENSMUST00000199939 1949 ntBASIC9.61□□□□□ -0.87
Nedd8P29595 Strip2-202ENSMUST00000115224 3524 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nedd8P29595 Tns1-208ENSMUST00000187584 9916 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Nedd8P29595 Gm43481-201ENSMUST00000201715 3672 ntBASIC9.61□□□□□ -0.87
Nedd8P29595 Gm4917-201ENSMUST00000121452 650 ntBASIC9.61□□□□□ -0.87
Nedd8P29595 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nedd8P29595 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC9.61□□□□□ -0.87
Nedd8P29595 Gm25700-201ENSMUST00000177693 110 ntBASIC9.61□□□□□ -0.87
Nedd8P29595 Gm16505-201ENSMUST00000179981 232 ntBASIC9.61□□□□□ -0.87
Nedd8P29595 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Nedd8P29595 Mir7051-201ENSMUST00000184167 73 ntBASIC9.61□□□□□ -0.87
Nedd8P29595 Gm28071-201ENSMUST00000190355 478 ntBASIC9.61□□□□□ -0.87
Nedd8P29595 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC9.61□□□□□ -0.87
Nedd8P29595 Gm40414-201ENSMUST00000197608 481 ntBASIC9.61□□□□□ -0.87
Nedd8P29595 Gm5130-201ENSMUST00000210233 959 ntBASIC9.61□□□□□ -0.87
Nedd8P29595 AC140451.2-201ENSMUST00000228030 664 ntBASIC9.61□□□□□ -0.87
Nedd8P29595 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nedd8P29595 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nedd8P29595 Olfr73-202ENSMUST00000129056 3048 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Nedd8P29595 Traf7-215ENSMUST00000176652 3003 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Nedd8P29595 Gm10390-201ENSMUST00000180812 3975 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nedd8P29595 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nedd8P29595 Zfp275-202ENSMUST00000114499 6284 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nedd8P29595 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nedd8P29595 Zdhhc9-201ENSMUST00000037960 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nedd8P29595 Gm26511-201ENSMUST00000181400 1895 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nedd8P29595 Gm1559-201ENSMUST00000219596 3117 ntTSL 3 BASIC9.61□□□□□ -0.87
Nedd8P29595 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Nedd8P29595 Tulp2-209ENSMUST00000210813 2153 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nedd8P29595 Sycp2l-201ENSMUST00000124093 2641 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Nedd8P29595 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nedd8P29595 Rdh16f1-201ENSMUST00000128247 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nedd8P29595 Gm37052-201ENSMUST00000194929 1831 ntBASIC9.61□□□□□ -0.87
Nedd8P29595 Gm13437-201ENSMUST00000122434 1981 ntBASIC9.61□□□□□ -0.87
Nedd8P29595 1700030K09Rik-201ENSMUST00000064853 2887 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nedd8P29595 Mapkap1-203ENSMUST00000113126 3018 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nedd8P29595 Six6-201ENSMUST00000021519 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nedd8P29595 Hecw2-201ENSMUST00000087659 11171 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Nedd8P29595 Ldb2-205ENSMUST00000199261 2367 ntAPPRIS ALT1 TSL 5 BASIC9.6□□□□□ -0.87
Nedd8P29595 Cdadc1-202ENSMUST00000056997 2202 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nedd8P29595 Gm3712-201ENSMUST00000118523 2071 ntBASIC9.6□□□□□ -0.87
Nedd8P29595 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nedd8P29595 Nfia-203ENSMUST00000092532 9382 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Nedd8P29595 Scrn3-201ENSMUST00000090811 3309 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nedd8P29595 Hdac7-206ENSMUST00000119670 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nedd8P29595 Nt5c1b-203ENSMUST00000143739 1570 ntTSL 2 BASIC9.6□□□□□ -0.87
Nedd8P29595 Pde6a-201ENSMUST00000025468 4421 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nedd8P29595 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nedd8P29595 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Nedd8P29595 Gm32552-201ENSMUST00000217849 2291 ntTSL 5 BASIC9.6□□□□□ -0.87
Nedd8P29595 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Nedd8P29595 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Nedd8P29595 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Nedd8P29595 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Nedd8P29595 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Nedd8P29595 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Nedd8P29595 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Nedd8P29595 Gm14028-201ENSMUST00000117434 479 ntBASIC9.6□□□□□ -0.87
Nedd8P29595 Gm15528-201ENSMUST00000117821 864 ntBASIC9.6□□□□□ -0.87
Nedd8P29595 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC9.6□□□□□ -0.87
Nedd8P29595 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
Nedd8P29595 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nedd8P29595 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Nedd8P29595 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC9.6□□□□□ -0.87
Nedd8P29595 Gm12407-201ENSMUST00000180219 324 ntBASIC9.6□□□□□ -0.87
Nedd8P29595 Mir6366-201ENSMUST00000184472 82 ntBASIC9.6□□□□□ -0.87
Nedd8P29595 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nedd8P29595 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC9.6□□□□□ -0.87
Nedd8P29595 Gm3961-201ENSMUST00000204425 994 ntBASIC9.6□□□□□ -0.87
Nedd8P29595 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC9.6□□□□□ -0.87
Nedd8P29595 Gm9619-201ENSMUST00000211587 762 ntBASIC9.6□□□□□ -0.87
Nedd8P29595 Gm19309-201ENSMUST00000218295 205 ntBASIC9.6□□□□□ -0.87
Nedd8P29595 CT573047.1-201ENSMUST00000223652 851 ntBASIC9.6□□□□□ -0.87
Nedd8P29595 AC154431.1-201ENSMUST00000224910 880 ntBASIC9.6□□□□□ -0.87
Nedd8P29595 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nedd8P29595 Kif28-201ENSMUST00000131716 3526 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Nedd8P29595 Sfmbt2-202ENSMUST00000114861 1813 ntTSL 5 BASIC9.6□□□□□ -0.87
Nedd8P29595 Cdc25b-201ENSMUST00000028804 3089 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nedd8P29595 Itga10-202ENSMUST00000119365 5035 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nedd8P29595 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Nedd8P29595 Itga10-201ENSMUST00000029744 5044 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Nedd8P29595 Kirrel3-208ENSMUST00000188933 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nedd8P29595 Fes-201ENSMUST00000080932 2762 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nedd8P29595 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nedd8P29595 Nlrc5-204ENSMUST00000182409 4552 ntTSL 5 BASIC9.6□□□□□ -0.87
Nedd8P29595 Arhgap19-201ENSMUST00000026150 5103 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nedd8P29595 Ubox5-201ENSMUST00000028761 3731 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nedd8P29595 St5-202ENSMUST00000079282 4255 ntAPPRIS P4 TSL 5 BASIC9.6□□□□□ -0.87
Nedd8P29595 Pzp-201ENSMUST00000112132 4681 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nedd8P29595 R3hcc1l-201ENSMUST00000026188 4112 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nedd8P29595 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Nedd8P29595 D930048N14Rik-201ENSMUST00000064493 3426 ntAPPRIS P5 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nedd8P29595 Gm35048-201ENSMUST00000192105 2802 ntBASIC9.6□□□□□ -0.87
Nedd8P29595 Zfp189-201ENSMUST00000042964 2835 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Nedd8P29595 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nedd8P29595 BC025920-202ENSMUST00000119492 1895 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms