Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 Mitf-202ENSMUST00000043637 4881 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 Gm43334-201ENSMUST00000197740 1318 ntBASIC9.37□□□□□ -0.91
P20040 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC9.37□□□□□ -0.91
P20040 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
P20040 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 Gm42971-201ENSMUST00000199228 2079 ntBASIC9.37□□□□□ -0.91
P20040 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
P20040 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
P20040 Gm14219-201ENSMUST00000120414 288 ntBASIC9.37□□□□□ -0.91
P20040 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 Gm12570-201ENSMUST00000122047 1030 ntBASIC9.37□□□□□ -0.91
P20040 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC9.37□□□□□ -0.91
P20040 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC9.37□□□□□ -0.91
P20040 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC9.37□□□□□ -0.91
P20040 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC9.37□□□□□ -0.91
P20040 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC9.37□□□□□ -0.91
P20040 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC9.37□□□□□ -0.91
P20040 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
P20040 Gm17798-201ENSMUST00000182282 1035 ntBASIC9.37□□□□□ -0.91
P20040 Gm9081-201ENSMUST00000182346 991 ntBASIC9.37□□□□□ -0.91
P20040 Gm29155-201ENSMUST00000185910 269 ntBASIC9.37□□□□□ -0.91
P20040 Gm37638-201ENSMUST00000194337 1123 ntBASIC9.37□□□□□ -0.91
P20040 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC9.37□□□□□ -0.91
P20040 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC9.37□□□□□ -0.91
P20040 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC9.37□□□□□ -0.91
P20040 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC9.37□□□□□ -0.91
P20040 Ap3s1-202ENSMUST00000224622 978 ntBASIC9.37□□□□□ -0.91
P20040 AC154305.2-201ENSMUST00000225813 901 ntBASIC9.37□□□□□ -0.91
P20040 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
P20040 AC154589.2-201ENSMUST00000228847 251 ntBASIC9.37□□□□□ -0.91
P20040 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 Gm5805-201ENSMUST00000072779 456 ntBASIC9.37□□□□□ -0.91
P20040 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
P20040 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
P20040 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
P20040 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC9.37□□□□□ -0.91
P20040 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC9.37□□□□□ -0.91
P20040 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC9.37□□□□□ -0.91
P20040 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC9.37□□□□□ -0.91
P20040 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
P20040 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC9.37□□□□□ -0.91
P20040 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
P20040 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
P20040 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P20040 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
P20040 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
P20040 4930539E08Rik-201ENSMUST00000062357 4597 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P20040 Gm6768-201ENSMUST00000022467 1878 ntBASIC9.36□□□□□ -0.91
P20040 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P20040 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
P20040 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P20040 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P20040 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
P20040 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC9.36□□□□□ -0.91
P20040 AC165148.1-201ENSMUST00000224795 2372 ntBASIC9.36□□□□□ -0.91
P20040 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
P20040 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC9.36□□□□□ -0.91
P20040 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P20040 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC9.36□□□□□ -0.91
P20040 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC9.36□□□□□ -0.91
P20040 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P20040 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC9.36□□□□□ -0.91
P20040 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
P20040 Plec-217ENSMUST00000169438 14827 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
P20040 5830462I19Rik-201ENSMUST00000168137 3383 ntBASIC9.36□□□□□ -0.91
P20040 Gm45867-201ENSMUST00000208201 2317 ntBASIC9.36□□□□□ -0.91
P20040 Gm37003-201ENSMUST00000194702 2827 ntBASIC9.36□□□□□ -0.91
P20040 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC9.36□□□□□ -0.91
P20040 Gm12791-201ENSMUST00000120788 655 ntBASIC9.36□□□□□ -0.91
P20040 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC9.36□□□□□ -0.91
P20040 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
P20040 Gm25343-201ENSMUST00000157460 107 ntBASIC9.36□□□□□ -0.91
P20040 Gm25661-201ENSMUST00000157704 296 ntBASIC9.36□□□□□ -0.91
P20040 Gm16165-201ENSMUST00000160140 795 ntBASIC9.36□□□□□ -0.91
P20040 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms