Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rc3h2P0C090 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rc3h2P0C090 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rc3h2P0C090 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rc3h2P0C090 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rc3h2P0C090 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rc3h2P0C090 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rc3h2P0C090 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rc3h2P0C090 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Rc3h2P0C090 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rc3h2P0C090 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rc3h2P0C090 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rc3h2P0C090 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.67
Rc3h2P0C090 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.83□□□□□ -0.68
Rc3h2P0C090 4930451G09Rik-201ENSMUST00000090457 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC10.83□□□□□ -0.68
Rc3h2P0C090 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Gm37688-201ENSMUST00000195195 465 ntBASIC10.83□□□□□ -0.68
Rc3h2P0C090 Gm5881-201ENSMUST00000204737 367 ntBASIC10.83□□□□□ -0.68
Rc3h2P0C090 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC10.83□□□□□ -0.68
Rc3h2P0C090 AC164883.7-201ENSMUST00000228534 851 ntBASIC10.83□□□□□ -0.68
Rc3h2P0C090 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Gm42941-201ENSMUST00000200347 1321 ntBASIC10.83□□□□□ -0.68
Rc3h2P0C090 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rc3h2P0C090 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Rc3h2P0C090 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Gm14006-201ENSMUST00000122132 981 ntBASIC10.82□□□□□ -0.68
Rc3h2P0C090 Gm24140-201ENSMUST00000122773 326 ntBASIC10.82□□□□□ -0.68
Rc3h2P0C090 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Gm42859-201ENSMUST00000199572 193 ntBASIC10.82□□□□□ -0.68
Rc3h2P0C090 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC10.82□□□□□ -0.68
Rc3h2P0C090 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Gm9644-201ENSMUST00000212828 1183 ntBASIC10.82□□□□□ -0.68
Rc3h2P0C090 Gm8796-201ENSMUST00000219122 936 ntBASIC10.82□□□□□ -0.68
Rc3h2P0C090 AC154213.1-201ENSMUST00000228234 583 ntBASIC10.82□□□□□ -0.68
Rc3h2P0C090 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC10.82□□□□□ -0.68
Rc3h2P0C090 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rc3h2P0C090 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms