Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 n-R5s142-201ENSMUST00000178820 119 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 n-R5s144-201ENSMUST00000178859 119 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 n-R5s139-201ENSMUST00000178975 119 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 n-R5s134-201ENSMUST00000178983 119 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 n-R5s136-201ENSMUST00000179080 119 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Gm25018-201ENSMUST00000179081 119 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 n-R5s104-201ENSMUST00000179107 119 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 n-R5s113-201ENSMUST00000179143 119 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 n-R5s133-201ENSMUST00000179275 119 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 n-R5s117-201ENSMUST00000179431 119 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Gm25212-201ENSMUST00000179432 119 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 n-R5s138-201ENSMUST00000179476 119 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 n-R5s122-201ENSMUST00000179500 119 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 n-R5s143-201ENSMUST00000179542 119 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 n-R5s107-201ENSMUST00000179704 119 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Gm26391-201ENSMUST00000179843 119 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 n-R5s110-201ENSMUST00000179995 119 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 n-R5s128-201ENSMUST00000180096 119 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 n-R5s124-201ENSMUST00000180334 119 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Gm18014-201ENSMUST00000183369 817 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Gm27861-201ENSMUST00000183920 214 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Gm42591-201ENSMUST00000197249 700 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Gm42588-201ENSMUST00000200538 1297 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Gm44605-201ENSMUST00000206892 949 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Gm4803-201ENSMUST00000218729 1279 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Gm24089-201ENSMUST00000093696 109 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Gm6768-201ENSMUST00000022467 1878 ntBASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Otud1Q9CUB6 Olfr1032-203ENSMUST00000111589 1393 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Gm45675-201ENSMUST00000211202 3429 ntBASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Gm37058-201ENSMUST00000193393 1644 ntBASIC10.26□□□□□ -0.77
Otud1Q9CUB6 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Gm12816-201ENSMUST00000118069 1212 ntBASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Gm15003-201ENSMUST00000118884 446 ntBASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Gm6758-201ENSMUST00000119643 1055 ntBASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Gm15620-201ENSMUST00000122949 270 ntBASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Gm5244-201ENSMUST00000164001 339 ntBASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Gm17070-201ENSMUST00000170463 784 ntBASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Ighv2-1-201ENSMUST00000170946 353 ntBASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Otud1Q9CUB6 Gm18733-202ENSMUST00000174447 401 ntBASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms