Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim29Q8R2Q0 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trim29Q8R2Q0 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim29Q8R2Q0 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trim29Q8R2Q0 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim29Q8R2Q0 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim29Q8R2Q0 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trim29Q8R2Q0 Gm42587-201ENSMUST00000198462 1981 ntBASIC12.08□□□□□ -0.48
Trim29Q8R2Q0 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim29Q8R2Q0 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim29Q8R2Q0 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim29Q8R2Q0 Gm5697-201ENSMUST00000122295 2482 ntBASIC12.08□□□□□ -0.48
Trim29Q8R2Q0 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Vma21-201ENSMUST00000114575 4290 ntTSL 2 BASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 AC140462.2-201ENSMUST00000225718 2433 ntBASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Daam1-201ENSMUST00000085299 5879 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Gm11735-201ENSMUST00000106377 1581 ntBASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Gm11980-201ENSMUST00000121445 986 ntBASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Gm14006-201ENSMUST00000122132 981 ntBASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Mir6958-201ENSMUST00000184207 73 ntBASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Gm28324-201ENSMUST00000187913 264 ntBASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Gm20781-201ENSMUST00000193154 693 ntBASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Gm21736-201ENSMUST00000195399 693 ntBASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Gm6423-201ENSMUST00000204315 934 ntBASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Gm18514-201ENSMUST00000218980 436 ntBASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Gm3619-201ENSMUST00000219947 775 ntBASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 n-R5s185-201ENSMUST00000083953 119 ntBASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Gm19327-201ENSMUST00000220651 3271 ntBASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim29Q8R2Q0 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Gm7052-201ENSMUST00000167568 1512 ntBASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Pdpr-201ENSMUST00000039333 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Clgn-201ENSMUST00000002259 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Gm24346-201ENSMUST00000158712 194 ntBASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Gm9372-201ENSMUST00000168454 430 ntBASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Gm29155-201ENSMUST00000185910 269 ntBASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Gm8625-201ENSMUST00000194185 1077 ntBASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 AC137950.2-201ENSMUST00000227127 1089 ntBASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Gm7536-201ENSMUST00000077389 444 ntBASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Gm37516-201ENSMUST00000192593 1954 ntBASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Dio2-201ENSMUST00000082432 5815 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim29Q8R2Q0 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms