Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim9Q8C7M3 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Gm45161-201ENSMUST00000207316 2263 ntBASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Gm16441-201ENSMUST00000138176 924 ntBASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Gm6038-201ENSMUST00000154310 948 ntBASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Gm16547-201ENSMUST00000159474 293 ntBASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Gm5130-201ENSMUST00000210233 959 ntBASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 CT010480.2-201ENSMUST00000225424 737 ntBASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Sfmbt2-202ENSMUST00000114861 1813 ntTSL 5 BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 AC124561.1-202ENSMUST00000228652 1929 ntBASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Zfp568-204ENSMUST00000177931 2013 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Clgn-201ENSMUST00000002259 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Tpm3-204ENSMUST00000119570 2233 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim9Q8C7M3 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Gm44888-201ENSMUST00000209119 2541 ntBASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Ik-201ENSMUST00000007042 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Zfp386-201ENSMUST00000073551 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Hist4h4-201ENSMUST00000179285 2863 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Gm14219-201ENSMUST00000120414 288 ntBASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Gm13022-201ENSMUST00000121181 285 ntBASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Gm43969-201ENSMUST00000204833 535 ntBASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Gm18059-201ENSMUST00000208073 580 ntBASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Cpvl-201ENSMUST00000166545 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Gm21817-201ENSMUST00000178584 2583 ntBASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Trim9Q8C7M3 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Creb3l4-202ENSMUST00000107369 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Gm43737-201ENSMUST00000199915 2740 ntBASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Adam1b-201ENSMUST00000079368 3338 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Gm22937-201ENSMUST00000103954 131 ntBASIC11.6□□□□□ -0.55
Trim9Q8C7M3 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms