Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC10.74□□□□□ -0.69
Sh3rf2Q8BZT2 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC10.74□□□□□ -0.69
Sh3rf2Q8BZT2 AC154436.1-201ENSMUST00000227272 782 ntBASIC10.74□□□□□ -0.69
Sh3rf2Q8BZT2 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sh3rf2Q8BZT2 Gm5424-201ENSMUST00000053865 1240 ntBASIC10.74□□□□□ -0.69
Sh3rf2Q8BZT2 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Sh3rf2Q8BZT2 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sh3rf2Q8BZT2 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC10.74□□□□□ -0.69
Sh3rf2Q8BZT2 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sh3rf2Q8BZT2 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sh3rf2Q8BZT2 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sh3rf2Q8BZT2 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sh3rf2Q8BZT2 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sh3rf2Q8BZT2 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.74□□□□□ -0.69
Sh3rf2Q8BZT2 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC10.74□□□□□ -0.69
Sh3rf2Q8BZT2 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Sh3rf2Q8BZT2 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sh3rf2Q8BZT2 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sh3rf2Q8BZT2 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC10.74□□□□□ -0.69
Sh3rf2Q8BZT2 Gm29101-201ENSMUST00000188329 1471 ntBASIC10.74□□□□□ -0.69
Sh3rf2Q8BZT2 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sh3rf2Q8BZT2 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sh3rf2Q8BZT2 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sh3rf2Q8BZT2 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sh3rf2Q8BZT2 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sh3rf2Q8BZT2 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 AC154220.1-201ENSMUST00000225033 1705 ntBASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Gm11235-201ENSMUST00000117763 333 ntBASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Gm12337-201ENSMUST00000119634 400 ntBASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Gm14231-201ENSMUST00000120090 592 ntBASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Gng5-ps-201ENSMUST00000120931 205 ntBASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Gm14148-201ENSMUST00000122433 1008 ntBASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Gm19566-201ENSMUST00000199576 610 ntBASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 AC133496.1-201ENSMUST00000223891 743 ntBASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Gm12097-201ENSMUST00000121523 1414 ntBASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sh3rf2Q8BZT2 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Gm22751-201ENSMUST00000102077 109 ntBASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Mir692-3-201ENSMUST00000102079 109 ntBASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Mir692-2-201ENSMUST00000102081 109 ntBASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Gm15264-201ENSMUST00000118050 502 ntBASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Gm4943-201ENSMUST00000132879 424 ntBASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sh3rf2Q8BZT2 Gm22662-201ENSMUST00000175290 256 ntBASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms