Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Gm27441-201ENSMUST00000185000 105 ntBASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Gm28746-201ENSMUST00000187453 380 ntBASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Gm42433-201ENSMUST00000196806 940 ntBASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 AC165260.5-201ENSMUST00000224640 1247 ntBASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 AC156790.2-201ENSMUST00000227115 568 ntBASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Cdc6-201ENSMUST00000092706 4614 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Gm45719-201ENSMUST00000207954 1662 ntBASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Gm5159-201ENSMUST00000212733 1652 ntBASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Gm13104-201ENSMUST00000119651 1446 ntBASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.49□□□□□ -0.73
Pcdh19Q80TF3 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Gm649-201ENSMUST00000117284 1054 ntBASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Gm15031-201ENSMUST00000121341 210 ntBASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Gm14006-201ENSMUST00000122132 981 ntBASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Gm37860-201ENSMUST00000195380 1034 ntBASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 AC140375.1-201ENSMUST00000225421 694 ntBASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 CT009713.2-201ENSMUST00000225532 1149 ntBASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 AC154806.5-202ENSMUST00000227217 1443 ntBASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Gm42521-201ENSMUST00000199190 2040 ntBASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pcdh19Q80TF3 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.47□□□□□ -0.73
Pcdh19Q80TF3 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms