Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps54Q5SPW0 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Vps54Q5SPW0 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps54Q5SPW0 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps54Q5SPW0 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps54Q5SPW0 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.67□□□□□ -0.38
Vps54Q5SPW0 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps54Q5SPW0 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps54Q5SPW0 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC12.67□□□□□ -0.38
Vps54Q5SPW0 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps54Q5SPW0 Gm14274-201ENSMUST00000117182 615 ntBASIC12.67□□□□□ -0.38
Vps54Q5SPW0 Gm15036-201ENSMUST00000118880 400 ntBASIC12.67□□□□□ -0.38
Vps54Q5SPW0 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC12.67□□□□□ -0.38
Vps54Q5SPW0 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC12.67□□□□□ -0.38
Vps54Q5SPW0 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC12.67□□□□□ -0.38
Vps54Q5SPW0 Aif1l-207ENSMUST00000148056 670 ntTSL 5 BASIC12.67□□□□□ -0.38
Vps54Q5SPW0 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC12.67□□□□□ -0.38
Vps54Q5SPW0 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps54Q5SPW0 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC12.67□□□□□ -0.38
Vps54Q5SPW0 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC12.67□□□□□ -0.38
Vps54Q5SPW0 AC149294.3-201ENSMUST00000226888 732 ntBASIC12.67□□□□□ -0.38
Vps54Q5SPW0 AC121567.1-201ENSMUST00000227213 842 ntBASIC12.67□□□□□ -0.38
Vps54Q5SPW0 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps54Q5SPW0 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps54Q5SPW0 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps54Q5SPW0 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps54Q5SPW0 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps54Q5SPW0 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vps54Q5SPW0 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC12.67□□□□□ -0.38
Vps54Q5SPW0 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC12.67□□□□□ -0.38
Vps54Q5SPW0 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps54Q5SPW0 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Gm42971-201ENSMUST00000199228 2079 ntBASIC12.66□□□□□ -0.38
Vps54Q5SPW0 AC154640.1-203ENSMUST00000228316 1618 ntBASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Gm12489-201ENSMUST00000119364 148 ntBASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Gm5808-201ENSMUST00000178090 357 ntBASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Gm27833-201ENSMUST00000184285 124 ntBASIC12.66□□□□□ -0.38
Vps54Q5SPW0 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Gm37782-201ENSMUST00000194879 678 ntBASIC12.66□□□□□ -0.38
Vps54Q5SPW0 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Gm10580-201ENSMUST00000097985 396 ntBASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Gm10582-201ENSMUST00000097987 396 ntBASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Gm10583-201ENSMUST00000097988 396 ntBASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Tnfaip8-212ENSMUST00000179937 2385 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.66□□□□□ -0.38
Vps54Q5SPW0 Gm15604-201ENSMUST00000118350 1456 ntBASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Gm42449-201ENSMUST00000200349 2258 ntBASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Vps54Q5SPW0 Gm14052-201ENSMUST00000121434 1031 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms