Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Gm45675-201ENSMUST00000211202 3429 ntBASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Gm38312-201ENSMUST00000195426 1746 ntBASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Prrg3-201ENSMUST00000048790 5931 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Gm11560-201ENSMUST00000117567 948 ntBASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Gm15264-201ENSMUST00000118050 502 ntBASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Gm44740-201ENSMUST00000205603 1614 ntBASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Syne3Q4FZC9 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Gm17192-201ENSMUST00000169031 511 ntBASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Gm20392-201ENSMUST00000173047 701 ntBASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Gm29155-201ENSMUST00000185910 269 ntBASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Gm6677-201ENSMUST00000195100 441 ntBASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Gm18466-201ENSMUST00000209147 499 ntBASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Gm8162-201ENSMUST00000213951 665 ntBASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Gm37058-201ENSMUST00000193393 1644 ntBASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Syne3Q4FZC9 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Ralgps1-201ENSMUST00000042615 6029 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Gm24248-201ENSMUST00000157321 322 ntBASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Syne3Q4FZC9 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms