Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Mis18bp1-201ENSMUST00000052201 4017 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Ttc16-205ENSMUST00000161089 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 C78197-201ENSMUST00000152781 3417 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim63Q38HM4 Bcl6b-201ENSMUST00000000326 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Pgm2-202ENSMUST00000102783 2523 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Cd22-202ENSMUST00000108125 3633 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Ablim1-206ENSMUST00000111528 2481 ntTSL 5 BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Ap2b1-205ENSMUST00000176430 3596 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Abi2-210ENSMUST00000189980 4115 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Rbpj-208ENSMUST00000201912 5485 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Tbccd1-201ENSMUST00000004576 2702 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Fmo5-203ENSMUST00000107050 5197 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Pear1-203ENSMUST00000090981 4314 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Otoa-201ENSMUST00000047025 3773 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Nell2-201ENSMUST00000075275 2675 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Atg14-201ENSMUST00000042988 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Cdkl4-201ENSMUST00000086545 2931 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Gm21026-201ENSMUST00000218628 1345 ntBASIC8.62□□□□□ -1.03
Trim63Q38HM4 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Cyp4a12b-201ENSMUST00000094887 2395 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Ptpn5-202ENSMUST00000102626 3137 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Celf2-211ENSMUST00000142941 2338 ntTSL 5 BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Fubp1-220ENSMUST00000200524 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC8.62□□□□□ -1.03
Trim63Q38HM4 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Gm22846-201ENSMUST00000157706 270 ntBASIC8.62□□□□□ -1.03
Trim63Q38HM4 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Mir8113-201ENSMUST00000184956 129 ntBASIC8.62□□□□□ -1.03
Trim63Q38HM4 Ighv5-8-202ENSMUST00000191967 337 ntBASIC8.62□□□□□ -1.03
Trim63Q38HM4 Gm3364-201ENSMUST00000196016 1217 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Gm6082-201ENSMUST00000215204 454 ntBASIC8.62□□□□□ -1.03
Trim63Q38HM4 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC8.62□□□□□ -1.03
Trim63Q38HM4 AC139382.1-201ENSMUST00000221402 498 ntBASIC8.62□□□□□ -1.03
Trim63Q38HM4 Gm18631-201ENSMUST00000223125 1043 ntBASIC8.62□□□□□ -1.03
Trim63Q38HM4 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Utp14a-201ENSMUST00000080713 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Aldoc-201ENSMUST00000017534 2786 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Luc7l-202ENSMUST00000114976 4934 ntAPPRIS P4 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Atxn1-203ENSMUST00000180110 3901 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Sez6l-203ENSMUST00000197425 3199 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Rpa1-201ENSMUST00000000767 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Cse1l-201ENSMUST00000002790 3641 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Spdye4b-201ENSMUST00000031574 2165 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Gm26902-201ENSMUST00000181307 3100 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Add2-201ENSMUST00000032069 3119 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Slc39a9-201ENSMUST00000085245 5201 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Adam6a-201ENSMUST00000053086 2558 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Trim63Q38HM4 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim63Q38HM4 Nrip3-202ENSMUST00000041460 3927 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trim63Q38HM4 Fgf13-202ENSMUST00000119306 2091 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trim63Q38HM4 Smyd3-204ENSMUST00000128302 6871 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim63Q38HM4 AC091458.1-201ENSMUST00000220902 1361 ntBASIC8.61□□□□□ -1.03
Trim63Q38HM4 Mia3-202ENSMUST00000109158 2961 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Trim63Q38HM4 B3gat1-205ENSMUST00000161115 3426 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim63Q38HM4 Gm44093-201ENSMUST00000204381 1802 ntBASIC8.61□□□□□ -1.03
Trim63Q38HM4 Cyp2e1-201ENSMUST00000026552 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim63Q38HM4 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC8.61□□□□□ -1.03
Trim63Q38HM4 Acot11-201ENSMUST00000065253 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim63Q38HM4 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
Trim63Q38HM4 Cep57l1-205ENSMUST00000187143 1769 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim63Q38HM4 Gm45205-201ENSMUST00000205745 3330 ntBASIC8.61□□□□□ -1.03
Trim63Q38HM4 Gfm2-209ENSMUST00000161825 4416 ntTSL 2 BASIC8.61□□□□□ -1.03
Trim63Q38HM4 Gm12758-201ENSMUST00000127010 4175 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trim63Q38HM4 Zmym1-201ENSMUST00000055013 3001 ntAPPRIS P2 TSL 2 BASIC8.61□□□□□ -1.03
Trim63Q38HM4 Slc38a1-203ENSMUST00000100262 7752 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim63Q38HM4 Zfp58-201ENSMUST00000076123 2391 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim63Q38HM4 Gm12116-201ENSMUST00000131851 2770 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trim63Q38HM4 Lrrfip1-203ENSMUST00000097649 3645 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trim63Q38HM4 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Trim63Q38HM4 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC8.61□□□□□ -1.03
Trim63Q38HM4 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trim63Q38HM4 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim63Q38HM4 Gm12928-201ENSMUST00000117115 573 ntBASIC8.61□□□□□ -1.03
Trim63Q38HM4 Gm12151-201ENSMUST00000121374 290 ntBASIC8.61□□□□□ -1.03
Trim63Q38HM4 Gm12570-201ENSMUST00000122047 1030 ntBASIC8.61□□□□□ -1.03
Trim63Q38HM4 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC8.61□□□□□ -1.03
Trim63Q38HM4 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC8.61□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms