Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.8□□□□□ -0.68
Ebf1Q07802 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ebf1Q07802 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC10.8□□□□□ -0.68
Ebf1Q07802 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.8□□□□□ -0.68
Ebf1Q07802 Gm12136-201ENSMUST00000120460 1209 ntBASIC10.8□□□□□ -0.68
Ebf1Q07802 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC10.8□□□□□ -0.68
Ebf1Q07802 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ebf1Q07802 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC10.8□□□□□ -0.68
Ebf1Q07802 Gm16228-201ENSMUST00000162286 809 ntBASIC10.8□□□□□ -0.68
Ebf1Q07802 Gm5976-201ENSMUST00000180794 996 ntBASIC10.8□□□□□ -0.68
Ebf1Q07802 Gm7928-201ENSMUST00000181249 701 ntBASIC10.8□□□□□ -0.68
Ebf1Q07802 Gm33707-201ENSMUST00000195135 569 ntBASIC10.8□□□□□ -0.68
Ebf1Q07802 Gm42732-201ENSMUST00000202887 1197 ntBASIC10.8□□□□□ -0.68
Ebf1Q07802 Gm30055-201ENSMUST00000203175 803 ntBASIC10.8□□□□□ -0.68
Ebf1Q07802 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC10.8□□□□□ -0.68
Ebf1Q07802 AC101205.2-201ENSMUST00000226206 715 ntBASIC10.8□□□□□ -0.68
Ebf1Q07802 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Ebf1Q07802 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Ebf1Q07802 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Ebf1Q07802 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.8□□□□□ -0.68
Ebf1Q07802 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.8□□□□□ -0.68
Ebf1Q07802 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ebf1Q07802 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 AC151836.1-201ENSMUST00000228730 1637 ntBASIC10.8□□□□□ -0.68
Ebf1Q07802 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.8□□□□□ -0.68
Ebf1Q07802 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ebf1Q07802 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.8□□□□□ -0.68
Ebf1Q07802 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf1Q07802 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC10.79□□□□□ -0.68
Ebf1Q07802 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf1Q07802 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf1Q07802 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Ebf1Q07802 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC10.79□□□□□ -0.68
Ebf1Q07802 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Ebf1Q07802 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf1Q07802 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf1Q07802 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf1Q07802 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Ebf1Q07802 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf1Q07802 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Ebf1Q07802 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Ebf1Q07802 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf1Q07802 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf1Q07802 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf1Q07802 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC10.79□□□□□ -0.68
Ebf1Q07802 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC10.79□□□□□ -0.68
Ebf1Q07802 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC10.79□□□□□ -0.68
Ebf1Q07802 Gm28671-201ENSMUST00000187036 692 ntBASIC10.79□□□□□ -0.68
Ebf1Q07802 Gm8226-201ENSMUST00000190511 798 ntBASIC10.79□□□□□ -0.68
Ebf1Q07802 Gm43667-201ENSMUST00000198616 1095 ntBASIC10.79□□□□□ -0.68
Ebf1Q07802 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC10.79□□□□□ -0.68
Ebf1Q07802 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf1Q07802 AC164087.2-201ENSMUST00000216206 1072 ntBASIC10.79□□□□□ -0.68
Ebf1Q07802 AC154477.1-201ENSMUST00000226515 773 ntBASIC10.79□□□□□ -0.68
Ebf1Q07802 AC137842.2-201ENSMUST00000227734 797 ntBASIC10.79□□□□□ -0.68
Ebf1Q07802 Gm5278-201ENSMUST00000055957 552 ntBASIC10.79□□□□□ -0.68
Ebf1Q07802 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf1Q07802 Gm25514-201ENSMUST00000083860 135 ntBASIC10.79□□□□□ -0.68
Ebf1Q07802 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf1Q07802 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC10.79□□□□□ -0.68
Ebf1Q07802 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Ebf1Q07802 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf1Q07802 Gm8320-201ENSMUST00000177584 1762 ntBASIC10.79□□□□□ -0.68
Ebf1Q07802 Gm8303-201ENSMUST00000178371 1762 ntBASIC10.79□□□□□ -0.68
Ebf1Q07802 Gm8331-201ENSMUST00000178433 1762 ntBASIC10.79□□□□□ -0.68
Ebf1Q07802 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf1Q07802 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf1Q07802 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf1Q07802 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf1Q07802 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf1Q07802 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC10.79□□□□□ -0.68
Ebf1Q07802 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf1Q07802 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf1Q07802 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf1Q07802 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.79□□□□□ -0.68
Ebf1Q07802 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf1Q07802 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf1Q07802 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf1Q07802 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf1Q07802 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Ebf1Q07802 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ebf1Q07802 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms