Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Mfap5-202ENSMUST00000118626 748 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Pip5k1bos-201ENSMUST00000126936 684 ntTSL 3 BASIC13.12□□□□□ -0.31
Cacna1sQ02789 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Rnasek-203ENSMUST00000141880 465 ntTSL 2 BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Ppp1r11-203ENSMUST00000174711 520 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Gm3534-201ENSMUST00000182522 1001 ntBASIC13.12□□□□□ -0.31
Cacna1sQ02789 Gm27403-201ENSMUST00000184662 214 ntBASIC13.12□□□□□ -0.31
Cacna1sQ02789 Gm37301-201ENSMUST00000195412 568 ntBASIC13.12□□□□□ -0.31
Cacna1sQ02789 Igkv3-11-201ENSMUST00000197500 385 ntBASIC13.12□□□□□ -0.31
Cacna1sQ02789 Gm7424-201ENSMUST00000206919 902 ntBASIC13.12□□□□□ -0.31
Cacna1sQ02789 E330011O21Rik-201ENSMUST00000209468 1107 ntTSL 5 BASIC13.12□□□□□ -0.31
Cacna1sQ02789 AC164123.1-201ENSMUST00000213385 447 ntTSL 5 BASIC13.12□□□□□ -0.31
Cacna1sQ02789 AC161763.1-201ENSMUST00000227063 168 ntBASIC13.12□□□□□ -0.31
Cacna1sQ02789 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Gm7052-201ENSMUST00000167568 1512 ntBASIC13.12□□□□□ -0.31
Cacna1sQ02789 Gm10113-201ENSMUST00000072437 3150 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Gps2-203ENSMUST00000116358 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Dnmt3l-ps1-201ENSMUST00000118734 1253 ntBASIC13.11□□□□□ -0.31
Cacna1sQ02789 Gm14182-201ENSMUST00000119334 210 ntBASIC13.11□□□□□ -0.31
Cacna1sQ02789 Gm11668-201ENSMUST00000119655 701 ntBASIC13.11□□□□□ -0.31
Cacna1sQ02789 Gm12133-201ENSMUST00000121775 661 ntBASIC13.11□□□□□ -0.31
Cacna1sQ02789 Alg13-203ENSMUST00000123710 604 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC13.11□□□□□ -0.31
Cacna1sQ02789 Gm2253-201ENSMUST00000211775 414 ntBASIC13.11□□□□□ -0.31
Cacna1sQ02789 AL844586.1-201ENSMUST00000224297 1042 ntBASIC13.11□□□□□ -0.31
Cacna1sQ02789 Apom-201ENSMUST00000025249 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cacna1sQ02789 AC159819.3-201ENSMUST00000216940 1837 ntBASIC13.11□□□□□ -0.31
Cacna1sQ02789 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Gm43290-201ENSMUST00000200359 1557 ntBASIC13.11□□□□□ -0.31
Cacna1sQ02789 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cacna1sQ02789 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Gm32849-201ENSMUST00000208696 1798 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cacna1sQ02789 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1sQ02789 Gm11100-201ENSMUST00000112652 1951 ntTSL 5 BASIC13.1□□□□□ -0.31
Cacna1sQ02789 Gm12700-201ENSMUST00000118145 457 ntBASIC13.1□□□□□ -0.31
Cacna1sQ02789 Fank1-202ENSMUST00000121560 475 ntTSL 5 BASIC13.1□□□□□ -0.31
Cacna1sQ02789 Gm40-201ENSMUST00000122131 660 ntBASIC13.1□□□□□ -0.31
Cacna1sQ02789 1700056N10Rik-201ENSMUST00000141875 1043 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1sQ02789 Gm13405-201ENSMUST00000146769 708 ntTSL 3 BASIC13.1□□□□□ -0.31
Cacna1sQ02789 1700083H02Rik-201ENSMUST00000190526 637 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1sQ02789 Gm30873-201ENSMUST00000207512 1222 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1sQ02789 Ang2-201ENSMUST00000051274 438 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cacna1sQ02789 Scp2-ps2-201ENSMUST00000072166 478 ntBASIC13.1□□□□□ -0.31
Cacna1sQ02789 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1sQ02789 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.1□□□□□ -0.31
Cacna1sQ02789 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cacna1sQ02789 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cacna1sQ02789 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1sQ02789 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1sQ02789 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1sQ02789 Lgals8-206ENSMUST00000135166 2416 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1sQ02789 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1sQ02789 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1sQ02789 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1sQ02789 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC13.1□□□□□ -0.31
Cacna1sQ02789 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1sQ02789 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1sQ02789 2900011O08Rik-201ENSMUST00000056521 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1sQ02789 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1sQ02789 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cacna1sQ02789 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC13.1□□□□□ -0.31
Cacna1sQ02789 Ccl19-203ENSMUST00000140546 773 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cacna1sQ02789 Ly6g6e-202ENSMUST00000172494 464 ntTSL 3 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms