Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC9.01□□□□□ -0.97
Smn1P97801 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC9.01□□□□□ -0.97
Smn1P97801 Mtfr1-204ENSMUST00000130645 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Anks1b-210ENSMUST00000182113 3553 ntTSL 5 BASIC9.01□□□□□ -0.97
Smn1P97801 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC9.01□□□□□ -0.97
Smn1P97801 Mfn2-201ENSMUST00000030884 4341 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Phf20-201ENSMUST00000037401 5737 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
Smn1P97801 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Zfp568-204ENSMUST00000177931 2013 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Smn1P97801 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Smn1P97801 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC9.01□□□□□ -0.97
Smn1P97801 Gm42780-201ENSMUST00000197083 734 ntBASIC9.01□□□□□ -0.97
Smn1P97801 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC9.01□□□□□ -0.97
Smn1P97801 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC9.01□□□□□ -0.97
Smn1P97801 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC9.01□□□□□ -0.97
Smn1P97801 Gm9176-201ENSMUST00000219955 1120 ntBASIC9.01□□□□□ -0.97
Smn1P97801 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC9.01□□□□□ -0.97
Smn1P97801 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Skiv2l-201ENSMUST00000046022 3951 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Gm5879-201ENSMUST00000089501 1209 ntBASIC9.01□□□□□ -0.97
Smn1P97801 Smarcc2-202ENSMUST00000099131 4562 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Smn1P97801 2900060N12Rik-201ENSMUST00000221412 3721 ntBASIC9.01□□□□□ -0.97
Smn1P97801 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Smn1P97801 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Eftud2-212ENSMUST00000173679 2889 ntTSL 5 BASIC9.01□□□□□ -0.97
Smn1P97801 Bub1b-201ENSMUST00000038341 3668 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Gm10857-201ENSMUST00000195343 2794 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Slco5a1-205ENSMUST00000146763 3437 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Smn1P97801 Gm15612-201ENSMUST00000147542 3118 ntTSL 2 BASIC9□□□□□ -0.97
Smn1P97801 Gm43633-201ENSMUST00000202455 2330 ntBASIC9□□□□□ -0.97
Smn1P97801 Cldn12-207ENSMUST00000179804 3752 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
Smn1P97801 Zfp264-202ENSMUST00000208781 2801 ntTSL 5 BASIC9□□□□□ -0.97
Smn1P97801 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC9□□□□□ -0.97
Smn1P97801 Myrf-205ENSMUST00000189897 3339 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
Smn1P97801 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Smn1P97801 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
Smn1P97801 Klhl7-202ENSMUST00000163409 2857 ntTSL 2 BASIC9□□□□□ -0.97
Smn1P97801 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Smn1P97801 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
Smn1P97801 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smn1P97801 Slc36a2-201ENSMUST00000039305 2429 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smn1P97801 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC9□□□□□ -0.97
Smn1P97801 Pms2-209ENSMUST00000148011 5482 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smn1P97801 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC9□□□□□ -0.97
Smn1P97801 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Smn1P97801 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC9□□□□□ -0.97
Smn1P97801 Gm7857-201ENSMUST00000117957 358 ntBASIC9□□□□□ -0.97
Smn1P97801 Gm8737-201ENSMUST00000122208 642 ntBASIC9□□□□□ -0.97
Smn1P97801 Slc2a4rg-ps-201ENSMUST00000127559 2976 ntTSL 1 (best) BASIC9□□□□□ -0.97
Smn1P97801 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC9□□□□□ -0.97
Smn1P97801 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
Smn1P97801 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smn1P97801 Gm19353-201ENSMUST00000184561 445 ntBASIC9□□□□□ -0.97
Smn1P97801 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC9□□□□□ -0.97
Smn1P97801 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC9□□□□□ -0.97
Smn1P97801 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC9□□□□□ -0.97
Smn1P97801 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC9□□□□□ -0.97
Smn1P97801 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC9□□□□□ -0.97
Smn1P97801 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC9□□□□□ -0.97
Smn1P97801 Gm5881-201ENSMUST00000204737 367 ntBASIC9□□□□□ -0.97
Smn1P97801 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC9□□□□□ -0.97
Smn1P97801 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC9□□□□□ -0.97
Smn1P97801 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC9□□□□□ -0.97
Smn1P97801 Id2-203ENSMUST00000222667 958 ntBASIC9□□□□□ -0.97
Smn1P97801 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Smn1P97801 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smn1P97801 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smn1P97801 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smn1P97801 Gm37058-201ENSMUST00000193393 1644 ntBASIC9□□□□□ -0.97
Smn1P97801 Habp2-202ENSMUST00000095948 2815 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Smn1P97801 Kng1-202ENSMUST00000039492 1985 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Smn1P97801 Smg7-202ENSMUST00000073441 5767 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Smn1P97801 Gm10425-201ENSMUST00000181085 3364 ntTSL 2 BASIC9□□□□□ -0.97
Smn1P97801 Nbr1-203ENSMUST00000103099 4789 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Smn1P97801 Gm44926-201ENSMUST00000207898 1826 ntBASIC9□□□□□ -0.97
Smn1P97801 Abcc4-202ENSMUST00000166646 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Smn1P97801 Sema4d-203ENSMUST00000110040 4472 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smn1P97801 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Smn1P97801 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms