Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Snora68-201ENSMUST00000104375 131 ntBASIC10.88□□□□□ -0.67
Ybx1P62960 Mir291b-201ENSMUST00000104838 79 ntBASIC10.88□□□□□ -0.67
Ybx1P62960 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ybx1P62960 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ybx1P62960 Gm11235-201ENSMUST00000117763 333 ntBASIC10.88□□□□□ -0.67
Ybx1P62960 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC10.88□□□□□ -0.67
Ybx1P62960 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC10.88□□□□□ -0.67
Ybx1P62960 Gm16228-201ENSMUST00000162286 809 ntBASIC10.88□□□□□ -0.67
Ybx1P62960 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ybx1P62960 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Ybx1P62960 Gm26875-201ENSMUST00000181006 950 ntBASIC10.88□□□□□ -0.67
Ybx1P62960 Gm18443-201ENSMUST00000185358 556 ntBASIC10.88□□□□□ -0.67
Ybx1P62960 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Ybx1P62960 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.88□□□□□ -0.67
Ybx1P62960 Gm17936-201ENSMUST00000199413 988 ntBASIC10.88□□□□□ -0.67
Ybx1P62960 Gm42859-201ENSMUST00000199572 193 ntBASIC10.88□□□□□ -0.67
Ybx1P62960 Gm18862-201ENSMUST00000204643 933 ntBASIC10.88□□□□□ -0.67
Ybx1P62960 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Ybx1P62960 Gm18122-201ENSMUST00000211390 904 ntBASIC10.88□□□□□ -0.67
Ybx1P62960 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ybx1P62960 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ybx1P62960 CT009764.1-201ENSMUST00000222260 483 ntBASIC10.88□□□□□ -0.67
Ybx1P62960 AC124581.2-201ENSMUST00000225459 282 ntBASIC10.88□□□□□ -0.67
Ybx1P62960 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ybx1P62960 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ybx1P62960 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ybx1P62960 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ybx1P62960 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ybx1P62960 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ybx1P62960 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ybx1P62960 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ybx1P62960 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ybx1P62960 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ybx1P62960 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.88□□□□□ -0.67
Ybx1P62960 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ybx1P62960 Gm8968-201ENSMUST00000199133 1303 ntBASIC10.87□□□□□ -0.67
Ybx1P62960 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ybx1P62960 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ybx1P62960 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ybx1P62960 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ybx1P62960 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ybx1P62960 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ybx1P62960 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Ybx1P62960 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ybx1P62960 Gm14639-201ENSMUST00000120850 866 ntBASIC10.87□□□□□ -0.67
Ybx1P62960 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ybx1P62960 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ybx1P62960 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC10.87□□□□□ -0.67
Ybx1P62960 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC10.87□□□□□ -0.67
Ybx1P62960 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC10.87□□□□□ -0.67
Ybx1P62960 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ybx1P62960 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC10.87□□□□□ -0.67
Ybx1P62960 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ybx1P62960 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ybx1P62960 Gm17799-201ENSMUST00000183270 667 ntBASIC10.87□□□□□ -0.67
Ybx1P62960 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC10.87□□□□□ -0.67
Ybx1P62960 Gm44044-201ENSMUST00000205178 1089 ntBASIC10.87□□□□□ -0.67
Ybx1P62960 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ybx1P62960 Gm18466-201ENSMUST00000209147 499 ntBASIC10.87□□□□□ -0.67
Ybx1P62960 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC10.87□□□□□ -0.67
Ybx1P62960 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC10.87□□□□□ -0.67
Ybx1P62960 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC10.87□□□□□ -0.67
Ybx1P62960 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC10.87□□□□□ -0.67
Ybx1P62960 Gm8615-201ENSMUST00000025307 771 ntBASIC10.87□□□□□ -0.67
Ybx1P62960 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ybx1P62960 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ybx1P62960 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Ybx1P62960 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Ybx1P62960 Gm8730-201ENSMUST00000076373 954 ntBASIC10.87□□□□□ -0.67
Ybx1P62960 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ybx1P62960 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ybx1P62960 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ybx1P62960 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ybx1P62960 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ybx1P62960 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ybx1P62960 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ybx1P62960 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ybx1P62960 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ybx1P62960 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ybx1P62960 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ybx1P62960 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ybx1P62960 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ybx1P62960 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ybx1P62960 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Ybx1P62960 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ybx1P62960 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ybx1P62960 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.86□□□□□ -0.67
Ybx1P62960 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ybx1P62960 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ybx1P62960 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ybx1P62960 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ybx1P62960 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ybx1P62960 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ybx1P62960 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ybx1P62960 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Ybx1P62960 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
Ybx1P62960 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ybx1P62960 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ybx1P62960 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC10.86□□□□□ -0.67
Ybx1P62960 Gm6517-201ENSMUST00000121056 511 ntBASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms