Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Pdx1P52946 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Pdx1P52946 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Pdx1P52946 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Pdx1P52946 Gm23576-201ENSMUST00000179918 110 ntBASIC10.45□□□□□ -0.74
Pdx1P52946 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Ighv5-8-202ENSMUST00000191967 337 ntBASIC10.45□□□□□ -0.74
Pdx1P52946 Gm37723-201ENSMUST00000194480 565 ntBASIC10.45□□□□□ -0.74
Pdx1P52946 Gm19166-201ENSMUST00000196041 1063 ntBASIC10.45□□□□□ -0.74
Pdx1P52946 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC10.45□□□□□ -0.74
Pdx1P52946 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC10.45□□□□□ -0.74
Pdx1P52946 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC10.45□□□□□ -0.74
Pdx1P52946 Gm5189-201ENSMUST00000221796 261 ntBASIC10.45□□□□□ -0.74
Pdx1P52946 AC154407.1-201ENSMUST00000226777 526 ntBASIC10.45□□□□□ -0.74
Pdx1P52946 AC161172.1-201ENSMUST00000227801 486 ntBASIC10.45□□□□□ -0.74
Pdx1P52946 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Pdx1P52946 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Pdx1P52946 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
Pdx1P52946 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Pdx1P52946 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC10.45□□□□□ -0.74
Pdx1P52946 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 AC125351.1-201ENSMUST00000221438 2223 ntBASIC10.45□□□□□ -0.74
Pdx1P52946 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Mak-203ENSMUST00000165087 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC10.44□□□□□ -0.74
Pdx1P52946 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
Pdx1P52946 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdx1P52946 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdx1P52946 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdx1P52946 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdx1P52946 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Pdx1P52946 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.44□□□□□ -0.74
Pdx1P52946 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdx1P52946 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdx1P52946 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdx1P52946 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pdx1P52946 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pdx1P52946 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.44□□□□□ -0.74
Pdx1P52946 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdx1P52946 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdx1P52946 Gm32914-201ENSMUST00000203815 2228 ntBASIC10.44□□□□□ -0.74
Pdx1P52946 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdx1P52946 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pdx1P52946 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Pdx1P52946 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdx1P52946 Gm11628-201ENSMUST00000117568 171 ntBASIC10.44□□□□□ -0.74
Pdx1P52946 Gm8482-201ENSMUST00000117972 471 ntBASIC10.44□□□□□ -0.74
Pdx1P52946 Gm13841-201ENSMUST00000118829 483 ntBASIC10.44□□□□□ -0.74
Pdx1P52946 Gm11449-201ENSMUST00000119175 476 ntBASIC10.44□□□□□ -0.74
Pdx1P52946 Gm14113-201ENSMUST00000121399 976 ntBASIC10.44□□□□□ -0.74
Pdx1P52946 Gm11675-201ENSMUST00000121873 832 ntBASIC10.44□□□□□ -0.74
Pdx1P52946 Gm22146-201ENSMUST00000157397 288 ntBASIC10.44□□□□□ -0.74
Pdx1P52946 Gm8210-201ENSMUST00000178557 483 ntBASIC10.44□□□□□ -0.74
Pdx1P52946 Gm15454-201ENSMUST00000179718 483 ntBASIC10.44□□□□□ -0.74
Pdx1P52946 Gm9162-201ENSMUST00000182081 991 ntBASIC10.44□□□□□ -0.74
Pdx1P52946 Gm44640-201ENSMUST00000206894 247 ntBASIC10.44□□□□□ -0.74
Pdx1P52946 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC10.44□□□□□ -0.74
Pdx1P52946 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pdx1P52946 Gm7959-201ENSMUST00000221823 1078 ntBASIC10.44□□□□□ -0.74
Pdx1P52946 CT030195.2-201ENSMUST00000226074 1286 ntBASIC10.44□□□□□ -0.74
Pdx1P52946 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pdx1P52946 Gm6344-201ENSMUST00000075962 483 ntBASIC10.44□□□□□ -0.74
Pdx1P52946 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pdx1P52946 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdx1P52946 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdx1P52946 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
Pdx1P52946 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdx1P52946 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdx1P52946 Gm45170-201ENSMUST00000206746 1671 ntBASIC10.44□□□□□ -0.74
Pdx1P52946 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdx1P52946 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdx1P52946 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdx1P52946 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC10.43□□□□□ -0.74
Pdx1P52946 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pdx1P52946 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdx1P52946 Gm15604-201ENSMUST00000118350 1456 ntBASIC10.43□□□□□ -0.74
Pdx1P52946 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdx1P52946 Zfp948-201ENSMUST00000088787 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdx1P52946 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdx1P52946 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pdx1P52946 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdx1P52946 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pdx1P52946 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Pdx1P52946 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pdx1P52946 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdx1P52946 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pdx1P52946 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pdx1P52946 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pdx1P52946 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms