Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Hoxd3P09027 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC8.65□□□□□ -1.02
Hoxd3P09027 Gm29663-201ENSMUST00000186962 853 ntBASIC8.65□□□□□ -1.02
Hoxd3P09027 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Hoxd3P09027 Gm38333-201ENSMUST00000193608 604 ntBASIC8.65□□□□□ -1.02
Hoxd3P09027 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC8.65□□□□□ -1.02
Hoxd3P09027 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC8.65□□□□□ -1.02
Hoxd3P09027 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Hoxd3P09027 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC8.65□□□□□ -1.02
Hoxd3P09027 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC8.65□□□□□ -1.02
Hoxd3P09027 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC8.65□□□□□ -1.02
Hoxd3P09027 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC8.65□□□□□ -1.02
Hoxd3P09027 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC8.65□□□□□ -1.02
Hoxd3P09027 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC8.65□□□□□ -1.02
Hoxd3P09027 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.02
Hoxd3P09027 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC8.65□□□□□ -1.02
Hoxd3P09027 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC8.65□□□□□ -1.02
Hoxd3P09027 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC8.65□□□□□ -1.02
Hoxd3P09027 Gm4811-201ENSMUST00000220879 1220 ntBASIC8.65□□□□□ -1.02
Hoxd3P09027 AC153152.3-201ENSMUST00000222188 1135 ntBASIC8.65□□□□□ -1.02
Hoxd3P09027 Cd40lg-201ENSMUST00000033466 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Hoxd3P09027 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Hoxd3P09027 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Hoxd3P09027 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Hoxd3P09027 Gm26203-201ENSMUST00000082911 114 ntBASIC8.65□□□□□ -1.02
Hoxd3P09027 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Hoxd3P09027 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Hoxd3P09027 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Hoxd3P09027 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Hoxd3P09027 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC8.65□□□□□ -1.02
Hoxd3P09027 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Hoxd3P09027 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Hoxd3P09027 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Hoxd3P09027 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Hoxd3P09027 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Hoxd3P09027 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Hoxd3P09027 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Hoxd3P09027 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Hoxd3P09027 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC8.65□□□□□ -1.03
Hoxd3P09027 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Hoxd3P09027 Gm45719-201ENSMUST00000207954 1662 ntBASIC8.65□□□□□ -1.03
Hoxd3P09027 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Hoxd3P09027 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Hoxd3P09027 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Hoxd3P09027 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.03
Hoxd3P09027 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Hoxd3P09027 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Hoxd3P09027 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Hoxd3P09027 Gm36987-201ENSMUST00000194704 2979 ntBASIC8.64□□□□□ -1.03
Hoxd3P09027 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd3P09027 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd3P09027 Gm3765-201ENSMUST00000130985 1447 ntBASIC8.64□□□□□ -1.03
Hoxd3P09027 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd3P09027 AC156790.4-202ENSMUST00000228838 1418 ntBASIC8.64□□□□□ -1.03
Hoxd3P09027 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd3P09027 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd3P09027 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC8.64□□□□□ -1.03
Hoxd3P09027 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC8.64□□□□□ -1.03
Hoxd3P09027 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd3P09027 AC132384.7-201ENSMUST00000220198 1391 ntBASIC8.64□□□□□ -1.03
Hoxd3P09027 Gm30655-201ENSMUST00000220498 1383 ntTSL 5 BASIC8.64□□□□□ -1.03
Hoxd3P09027 Gm37806-201ENSMUST00000194524 6387 ntBASIC8.64□□□□□ -1.03
Hoxd3P09027 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd3P09027 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd3P09027 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd3P09027 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Hoxd3P09027 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Hoxd3P09027 Mir453-201ENSMUST00000104732 82 ntBASIC8.64□□□□□ -1.03
Hoxd3P09027 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC8.64□□□□□ -1.03
Hoxd3P09027 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Hoxd3P09027 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC8.64□□□□□ -1.03
Hoxd3P09027 Gm14900-201ENSMUST00000120304 733 ntBASIC8.64□□□□□ -1.03
Hoxd3P09027 Gm14599-201ENSMUST00000120469 474 ntBASIC8.64□□□□□ -1.03
Hoxd3P09027 Gm13754-201ENSMUST00000120486 998 ntBASIC8.64□□□□□ -1.03
Hoxd3P09027 Gm13284-201ENSMUST00000121020 547 ntBASIC8.64□□□□□ -1.03
Hoxd3P09027 Gm12628-201ENSMUST00000122193 382 ntBASIC8.64□□□□□ -1.03
Hoxd3P09027 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd3P09027 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd3P09027 Gm4473-201ENSMUST00000145987 657 ntTSL 2 BASIC8.64□□□□□ -1.03
Hoxd3P09027 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC8.64□□□□□ -1.03
Hoxd3P09027 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC8.64□□□□□ -1.03
Hoxd3P09027 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC8.64□□□□□ -1.03
Hoxd3P09027 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd3P09027 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC8.64□□□□□ -1.03
Hoxd3P09027 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd3P09027 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC8.64□□□□□ -1.03
Hoxd3P09027 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd3P09027 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd3P09027 Gm43671-201ENSMUST00000200422 433 ntBASIC8.64□□□□□ -1.03
Hoxd3P09027 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC8.64□□□□□ -1.03
Hoxd3P09027 Gm42655-201ENSMUST00000202782 1134 ntBASIC8.64□□□□□ -1.03
Hoxd3P09027 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC8.64□□□□□ -1.03
Hoxd3P09027 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
Hoxd3P09027 Gm44954-201ENSMUST00000208513 227 ntBASIC8.64□□□□□ -1.03
Hoxd3P09027 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Hoxd3P09027 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC8.64□□□□□ -1.03
Hoxd3P09027 Gm31763-201ENSMUST00000217788 673 ntTSL 3 BASIC8.64□□□□□ -1.03
Hoxd3P09027 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC8.64□□□□□ -1.03
Hoxd3P09027 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Hoxd3P09027 Gm10254-201ENSMUST00000052888 867 ntBASIC8.64□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms