Protein–RNA interactions for Protein: S4R1W1

Gm3839, Glyceraldehyde-3-phosphate dehydrogenase, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3839S4R1W1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3839S4R1W1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3839S4R1W1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3839S4R1W1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3839S4R1W1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3839S4R1W1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Gm3839S4R1W1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm3839S4R1W1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Gm3839S4R1W1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3839S4R1W1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Gm3839S4R1W1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3839S4R1W1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.78■□□□□ 0.44
Gm3839S4R1W1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Gm3839S4R1W1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3839S4R1W1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm3839S4R1W1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Gm3839S4R1W1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm3839S4R1W1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm3839S4R1W1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm3839S4R1W1 Gm12821-201ENSMUST00000120022 600 ntBASIC17.77■□□□□ 0.44
Gm3839S4R1W1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm3839S4R1W1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm3839S4R1W1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm3839S4R1W1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm3839S4R1W1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm3839S4R1W1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.77■□□□□ 0.43
Gm3839S4R1W1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm3839S4R1W1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.77■□□□□ 0.43
Gm3839S4R1W1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3839S4R1W1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3839S4R1W1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3839S4R1W1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3839S4R1W1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.76■□□□□ 0.43
Gm3839S4R1W1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Gm3839S4R1W1 Mir6236-201ENSMUST00000184437 123 ntBASIC17.76■□□□□ 0.43
Gm3839S4R1W1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3839S4R1W1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.76■□□□□ 0.43
Gm3839S4R1W1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3839S4R1W1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3839S4R1W1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3839S4R1W1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm3839S4R1W1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3839S4R1W1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3839S4R1W1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Gm3839S4R1W1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Gm3839S4R1W1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3839S4R1W1 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.75■□□□□ 0.43
Gm3839S4R1W1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3839S4R1W1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3839S4R1W1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3839S4R1W1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm3839S4R1W1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Gm3839S4R1W1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3839S4R1W1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3839S4R1W1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3839S4R1W1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Gm3839S4R1W1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.74■□□□□ 0.43
Gm3839S4R1W1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.74■□□□□ 0.43
Gm3839S4R1W1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3839S4R1W1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3839S4R1W1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm3839S4R1W1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm3839S4R1W1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm3839S4R1W1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm3839S4R1W1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gm3839S4R1W1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Gm3839S4R1W1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.73■□□□□ 0.43
Gm3839S4R1W1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Gm3839S4R1W1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
Gm3839S4R1W1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.73■□□□□ 0.43
Gm3839S4R1W1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Gm3839S4R1W1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gm3839S4R1W1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm3839S4R1W1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Gm3839S4R1W1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3839S4R1W1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Gm3839S4R1W1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3839S4R1W1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3839S4R1W1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.72■□□□□ 0.43
Gm3839S4R1W1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Gm3839S4R1W1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3839S4R1W1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3839S4R1W1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3839S4R1W1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3839S4R1W1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Gm3839S4R1W1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3839S4R1W1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3839S4R1W1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm3839S4R1W1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm3839S4R1W1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm3839S4R1W1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm3839S4R1W1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gm3839S4R1W1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gm3839S4R1W1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Gm3839S4R1W1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm3839S4R1W1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm3839S4R1W1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.71■□□□□ 0.43
Gm3839S4R1W1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gm3839S4R1W1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm3839S4R1W1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms