Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
H2afb2S4R1M3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.94■□□□□ 0.78
H2afb2S4R1M3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.94■□□□□ 0.78
H2afb2S4R1M3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
H2afb2S4R1M3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
H2afb2S4R1M3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
H2afb2S4R1M3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
H2afb2S4R1M3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
H2afb2S4R1M3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
H2afb2S4R1M3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
H2afb2S4R1M3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.94■□□□□ 0.78
H2afb2S4R1M3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
H2afb2S4R1M3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
H2afb2S4R1M3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
H2afb2S4R1M3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
H2afb2S4R1M3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
H2afb2S4R1M3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
H2afb2S4R1M3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
H2afb2S4R1M3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
H2afb2S4R1M3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.93■□□□□ 0.78
H2afb2S4R1M3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
H2afb2S4R1M3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
H2afb2S4R1M3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
H2afb2S4R1M3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
H2afb2S4R1M3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
H2afb2S4R1M3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
H2afb2S4R1M3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H2afb2S4R1M3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.92■□□□□ 0.78
H2afb2S4R1M3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H2afb2S4R1M3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H2afb2S4R1M3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
H2afb2S4R1M3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H2afb2S4R1M3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
H2afb2S4R1M3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
H2afb2S4R1M3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
H2afb2S4R1M3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
H2afb2S4R1M3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
H2afb2S4R1M3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.91■□□□□ 0.78
H2afb2S4R1M3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
H2afb2S4R1M3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
H2afb2S4R1M3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
H2afb2S4R1M3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
H2afb2S4R1M3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
H2afb2S4R1M3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
H2afb2S4R1M3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
H2afb2S4R1M3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
H2afb2S4R1M3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
H2afb2S4R1M3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.9■□□□□ 0.78
H2afb2S4R1M3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
H2afb2S4R1M3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
H2afb2S4R1M3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
H2afb2S4R1M3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
H2afb2S4R1M3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
H2afb2S4R1M3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
H2afb2S4R1M3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
H2afb2S4R1M3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
H2afb2S4R1M3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
H2afb2S4R1M3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
H2afb2S4R1M3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
H2afb2S4R1M3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
H2afb2S4R1M3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
H2afb2S4R1M3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
H2afb2S4R1M3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
H2afb2S4R1M3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
H2afb2S4R1M3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
H2afb2S4R1M3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
H2afb2S4R1M3 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.88■□□□□ 0.77
H2afb2S4R1M3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
H2afb2S4R1M3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
H2afb2S4R1M3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.88■□□□□ 0.77
H2afb2S4R1M3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.88■□□□□ 0.77
H2afb2S4R1M3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
H2afb2S4R1M3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
H2afb2S4R1M3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
H2afb2S4R1M3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
H2afb2S4R1M3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
H2afb2S4R1M3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
H2afb2S4R1M3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
H2afb2S4R1M3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
H2afb2S4R1M3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
H2afb2S4R1M3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
H2afb2S4R1M3 Gm12922-201ENSMUST00000120626 809 ntBASIC19.87■□□□□ 0.77
H2afb2S4R1M3 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.87■□□□□ 0.77
H2afb2S4R1M3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.87■□□□□ 0.77
H2afb2S4R1M3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
H2afb2S4R1M3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
H2afb2S4R1M3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
H2afb2S4R1M3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
H2afb2S4R1M3 Notumos-201ENSMUST00000151998 2659 ntBASIC19.87■□□□□ 0.77
H2afb2S4R1M3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
H2afb2S4R1M3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
H2afb2S4R1M3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
H2afb2S4R1M3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
H2afb2S4R1M3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
H2afb2S4R1M3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
H2afb2S4R1M3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
H2afb2S4R1M3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
H2afb2S4R1M3 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.86■□□□□ 0.77
H2afb2S4R1M3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
H2afb2S4R1M3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms