Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
H2afb3S4R1G7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2afb3S4R1G7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
H2afb3S4R1G7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2afb3S4R1G7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
H2afb3S4R1G7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.85■□□□□ 0.45
H2afb3S4R1G7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
H2afb3S4R1G7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
H2afb3S4R1G7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.84■□□□□ 0.45
H2afb3S4R1G7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
H2afb3S4R1G7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.84■□□□□ 0.45
H2afb3S4R1G7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
H2afb3S4R1G7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
H2afb3S4R1G7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
H2afb3S4R1G7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
H2afb3S4R1G7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
H2afb3S4R1G7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
H2afb3S4R1G7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
H2afb3S4R1G7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
H2afb3S4R1G7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
H2afb3S4R1G7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
H2afb3S4R1G7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
H2afb3S4R1G7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
H2afb3S4R1G7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
H2afb3S4R1G7 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
H2afb3S4R1G7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
H2afb3S4R1G7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
H2afb3S4R1G7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
H2afb3S4R1G7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
H2afb3S4R1G7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
H2afb3S4R1G7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
H2afb3S4R1G7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.83■□□□□ 0.44
H2afb3S4R1G7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
H2afb3S4R1G7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
H2afb3S4R1G7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb3S4R1G7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb3S4R1G7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb3S4R1G7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb3S4R1G7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb3S4R1G7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb3S4R1G7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
H2afb3S4R1G7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
H2afb3S4R1G7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.81■□□□□ 0.44
H2afb3S4R1G7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2afb3S4R1G7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2afb3S4R1G7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2afb3S4R1G7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
H2afb3S4R1G7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.81■□□□□ 0.44
H2afb3S4R1G7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.81■□□□□ 0.44
H2afb3S4R1G7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
H2afb3S4R1G7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2afb3S4R1G7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2afb3S4R1G7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2afb3S4R1G7 Gm15820-201ENSMUST00000201566 728 ntBASIC17.8■□□□□ 0.44
H2afb3S4R1G7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2afb3S4R1G7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
H2afb3S4R1G7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
H2afb3S4R1G7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
H2afb3S4R1G7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
H2afb3S4R1G7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
H2afb3S4R1G7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
H2afb3S4R1G7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
H2afb3S4R1G7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
H2afb3S4R1G7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
H2afb3S4R1G7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
H2afb3S4R1G7 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.79■□□□□ 0.44
H2afb3S4R1G7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
H2afb3S4R1G7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
H2afb3S4R1G7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
H2afb3S4R1G7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.79■□□□□ 0.44
H2afb3S4R1G7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.78■□□□□ 0.44
H2afb3S4R1G7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
H2afb3S4R1G7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
H2afb3S4R1G7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
H2afb3S4R1G7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
H2afb3S4R1G7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
H2afb3S4R1G7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
H2afb3S4R1G7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
H2afb3S4R1G7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
H2afb3S4R1G7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
H2afb3S4R1G7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
H2afb3S4R1G7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
H2afb3S4R1G7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
H2afb3S4R1G7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
H2afb3S4R1G7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
H2afb3S4R1G7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
H2afb3S4R1G7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
H2afb3S4R1G7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
H2afb3S4R1G7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
H2afb3S4R1G7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
H2afb3S4R1G7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
H2afb3S4R1G7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afb3S4R1G7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afb3S4R1G7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afb3S4R1G7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
H2afb3S4R1G7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afb3S4R1G7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
H2afb3S4R1G7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.76■□□□□ 0.43
H2afb3S4R1G7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.76■□□□□ 0.43
H2afb3S4R1G7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms