Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nr1h3Q9Z0Y9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nr1h3Q9Z0Y9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Nr1h3Q9Z0Y9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Nr1h3Q9Z0Y9 Gm29257-201ENSMUST00000186115 639 ntBASIC21.63■■□□□ 1.05
Nr1h3Q9Z0Y9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nr1h3Q9Z0Y9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nr1h3Q9Z0Y9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nr1h3Q9Z0Y9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nr1h3Q9Z0Y9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nr1h3Q9Z0Y9 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.62■■□□□ 1.05
Nr1h3Q9Z0Y9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Nr1h3Q9Z0Y9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Nr1h3Q9Z0Y9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.62■■□□□ 1.05
Nr1h3Q9Z0Y9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nr1h3Q9Z0Y9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nr1h3Q9Z0Y9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Nr1h3Q9Z0Y9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.61■■□□□ 1.05
Nr1h3Q9Z0Y9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Nr1h3Q9Z0Y9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.61■■□□□ 1.05
Nr1h3Q9Z0Y9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nr1h3Q9Z0Y9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nr1h3Q9Z0Y9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nr1h3Q9Z0Y9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nr1h3Q9Z0Y9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nr1h3Q9Z0Y9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nr1h3Q9Z0Y9 Gm27405-201ENSMUST00000184201 112 ntBASIC21.6■■□□□ 1.05
Nr1h3Q9Z0Y9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.6■■□□□ 1.05
Nr1h3Q9Z0Y9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Nr1h3Q9Z0Y9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nr1h3Q9Z0Y9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
Nr1h3Q9Z0Y9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Nr1h3Q9Z0Y9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Nr1h3Q9Z0Y9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.6■■□□□ 1.05
Nr1h3Q9Z0Y9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Nr1h3Q9Z0Y9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Nr1h3Q9Z0Y9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Nr1h3Q9Z0Y9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nr1h3Q9Z0Y9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nr1h3Q9Z0Y9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nr1h3Q9Z0Y9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nr1h3Q9Z0Y9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Nr1h3Q9Z0Y9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nr1h3Q9Z0Y9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nr1h3Q9Z0Y9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nr1h3Q9Z0Y9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Nr1h3Q9Z0Y9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Nr1h3Q9Z0Y9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Nr1h3Q9Z0Y9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nr1h3Q9Z0Y9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nr1h3Q9Z0Y9 Gm26571-201ENSMUST00000181399 666 ntBASIC21.58■■□□□ 1.05
Nr1h3Q9Z0Y9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.58■■□□□ 1.05
Nr1h3Q9Z0Y9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.58■■□□□ 1.05
Nr1h3Q9Z0Y9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Nr1h3Q9Z0Y9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nr1h3Q9Z0Y9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Nr1h3Q9Z0Y9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Nr1h3Q9Z0Y9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Nr1h3Q9Z0Y9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.04
Nr1h3Q9Z0Y9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Nr1h3Q9Z0Y9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Nr1h3Q9Z0Y9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Nr1h3Q9Z0Y9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nr1h3Q9Z0Y9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nr1h3Q9Z0Y9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nr1h3Q9Z0Y9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.57■■□□□ 1.04
Nr1h3Q9Z0Y9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Nr1h3Q9Z0Y9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nr1h3Q9Z0Y9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nr1h3Q9Z0Y9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nr1h3Q9Z0Y9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nr1h3Q9Z0Y9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nr1h3Q9Z0Y9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nr1h3Q9Z0Y9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Nr1h3Q9Z0Y9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nr1h3Q9Z0Y9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Nr1h3Q9Z0Y9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nr1h3Q9Z0Y9 Gm11421-201ENSMUST00000122124 294 ntBASIC21.56■■□□□ 1.04
Nr1h3Q9Z0Y9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nr1h3Q9Z0Y9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Nr1h3Q9Z0Y9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.56■■□□□ 1.04
Nr1h3Q9Z0Y9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.56■■□□□ 1.04
Nr1h3Q9Z0Y9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Nr1h3Q9Z0Y9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.56■■□□□ 1.04
Nr1h3Q9Z0Y9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.56■■□□□ 1.04
Nr1h3Q9Z0Y9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.56■■□□□ 1.04
Nr1h3Q9Z0Y9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nr1h3Q9Z0Y9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nr1h3Q9Z0Y9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nr1h3Q9Z0Y9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Nr1h3Q9Z0Y9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nr1h3Q9Z0Y9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nr1h3Q9Z0Y9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nr1h3Q9Z0Y9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nr1h3Q9Z0Y9 Mir6236-201ENSMUST00000184437 123 ntBASIC21.55■■□□□ 1.04
Nr1h3Q9Z0Y9 Gm18671-201ENSMUST00000214826 683 ntBASIC21.55■■□□□ 1.04
Nr1h3Q9Z0Y9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nr1h3Q9Z0Y9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Nr1h3Q9Z0Y9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nr1h3Q9Z0Y9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms