Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn9Q9Z0S7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn9Q9Z0S7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.19■□□□□ 0.66
Cldn9Q9Z0S7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn9Q9Z0S7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Cldn9Q9Z0S7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.19■□□□□ 0.66
Cldn9Q9Z0S7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn9Q9Z0S7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn9Q9Z0S7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn9Q9Z0S7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn9Q9Z0S7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn9Q9Z0S7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Cldn9Q9Z0S7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.18■□□□□ 0.66
Cldn9Q9Z0S7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn9Q9Z0S7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn9Q9Z0S7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn9Q9Z0S7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn9Q9Z0S7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn9Q9Z0S7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn9Q9Z0S7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Cldn9Q9Z0S7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn9Q9Z0S7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.17■□□□□ 0.66
Cldn9Q9Z0S7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.17■□□□□ 0.66
Cldn9Q9Z0S7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn9Q9Z0S7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn9Q9Z0S7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn9Q9Z0S7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn9Q9Z0S7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.16■□□□□ 0.66
Cldn9Q9Z0S7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn9Q9Z0S7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.15■□□□□ 0.66
Cldn9Q9Z0S7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn9Q9Z0S7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn9Q9Z0S7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.15■□□□□ 0.66
Cldn9Q9Z0S7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn9Q9Z0S7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.15■□□□□ 0.66
Cldn9Q9Z0S7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn9Q9Z0S7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.15■□□□□ 0.66
Cldn9Q9Z0S7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cldn9Q9Z0S7 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.15■□□□□ 0.66
Cldn9Q9Z0S7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.15■□□□□ 0.66
Cldn9Q9Z0S7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn9Q9Z0S7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn9Q9Z0S7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn9Q9Z0S7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cldn9Q9Z0S7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cldn9Q9Z0S7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn9Q9Z0S7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn9Q9Z0S7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn9Q9Z0S7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn9Q9Z0S7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.14■□□□□ 0.65
Cldn9Q9Z0S7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn9Q9Z0S7 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn9Q9Z0S7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn9Q9Z0S7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn9Q9Z0S7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn9Q9Z0S7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn9Q9Z0S7 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn9Q9Z0S7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Cldn9Q9Z0S7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Cldn9Q9Z0S7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn9Q9Z0S7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.13■□□□□ 0.65
Cldn9Q9Z0S7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn9Q9Z0S7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.13■□□□□ 0.65
Cldn9Q9Z0S7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn9Q9Z0S7 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn9Q9Z0S7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn9Q9Z0S7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn9Q9Z0S7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn9Q9Z0S7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn9Q9Z0S7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Cldn9Q9Z0S7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn9Q9Z0S7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Cldn9Q9Z0S7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn9Q9Z0S7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn9Q9Z0S7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.12■□□□□ 0.65
Cldn9Q9Z0S7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn9Q9Z0S7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn9Q9Z0S7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn9Q9Z0S7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn9Q9Z0S7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Cldn9Q9Z0S7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn9Q9Z0S7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn9Q9Z0S7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn9Q9Z0S7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn9Q9Z0S7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn9Q9Z0S7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn9Q9Z0S7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn9Q9Z0S7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn9Q9Z0S7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn9Q9Z0S7 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.1■□□□□ 0.65
Cldn9Q9Z0S7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn9Q9Z0S7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.09■□□□□ 0.65
Cldn9Q9Z0S7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.09■□□□□ 0.65
Cldn9Q9Z0S7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.09■□□□□ 0.65
Cldn9Q9Z0S7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn9Q9Z0S7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn9Q9Z0S7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn9Q9Z0S7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn9Q9Z0S7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn9Q9Z0S7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 320.7 ms