Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn8aQ9WTU3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.28■□□□□ 0.84
Scn8aQ9WTU3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scn8aQ9WTU3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scn8aQ9WTU3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Scn8aQ9WTU3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Scn8aQ9WTU3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.28■□□□□ 0.84
Scn8aQ9WTU3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.28■□□□□ 0.84
Scn8aQ9WTU3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn8aQ9WTU3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Scn8aQ9WTU3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scn8aQ9WTU3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Scn8aQ9WTU3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scn8aQ9WTU3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Scn8aQ9WTU3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Scn8aQ9WTU3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn8aQ9WTU3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Scn8aQ9WTU3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn8aQ9WTU3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn8aQ9WTU3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn8aQ9WTU3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.27■□□□□ 0.84
Scn8aQ9WTU3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.27■□□□□ 0.84
Scn8aQ9WTU3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Scn8aQ9WTU3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Scn8aQ9WTU3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scn8aQ9WTU3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn8aQ9WTU3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Scn8aQ9WTU3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Scn8aQ9WTU3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Scn8aQ9WTU3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn8aQ9WTU3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.26■□□□□ 0.83
Scn8aQ9WTU3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn8aQ9WTU3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scn8aQ9WTU3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn8aQ9WTU3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.26■□□□□ 0.83
Scn8aQ9WTU3 Gm18284-201ENSMUST00000172604 624 ntBASIC20.26■□□□□ 0.83
Scn8aQ9WTU3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scn8aQ9WTU3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn8aQ9WTU3 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Scn8aQ9WTU3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
Scn8aQ9WTU3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn8aQ9WTU3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Scn8aQ9WTU3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn8aQ9WTU3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Scn8aQ9WTU3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.25■□□□□ 0.83
Scn8aQ9WTU3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.25■□□□□ 0.83
Scn8aQ9WTU3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Scn8aQ9WTU3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn8aQ9WTU3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.25■□□□□ 0.83
Scn8aQ9WTU3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Scn8aQ9WTU3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Scn8aQ9WTU3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.25■□□□□ 0.83
Scn8aQ9WTU3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Scn8aQ9WTU3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn8aQ9WTU3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn8aQ9WTU3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn8aQ9WTU3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn8aQ9WTU3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.23■□□□□ 0.83
Scn8aQ9WTU3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn8aQ9WTU3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn8aQ9WTU3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scn8aQ9WTU3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn8aQ9WTU3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Scn8aQ9WTU3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn8aQ9WTU3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn8aQ9WTU3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn8aQ9WTU3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn8aQ9WTU3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn8aQ9WTU3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn8aQ9WTU3 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn8aQ9WTU3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Scn8aQ9WTU3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Scn8aQ9WTU3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scn8aQ9WTU3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn8aQ9WTU3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn8aQ9WTU3 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.21■□□□□ 0.83
Scn8aQ9WTU3 Gm26571-201ENSMUST00000181399 666 ntBASIC20.21■□□□□ 0.83
Scn8aQ9WTU3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn8aQ9WTU3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn8aQ9WTU3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Scn8aQ9WTU3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Scn8aQ9WTU3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.21■□□□□ 0.83
Scn8aQ9WTU3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn8aQ9WTU3 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Scn8aQ9WTU3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Scn8aQ9WTU3 Gm27801-201ENSMUST00000184174 223 ntBASIC20.2■□□□□ 0.82
Scn8aQ9WTU3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn8aQ9WTU3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn8aQ9WTU3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn8aQ9WTU3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Scn8aQ9WTU3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Scn8aQ9WTU3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Scn8aQ9WTU3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Scn8aQ9WTU3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn8aQ9WTU3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn8aQ9WTU3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Scn8aQ9WTU3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn8aQ9WTU3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.19■□□□□ 0.82
Scn8aQ9WTU3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn8aQ9WTU3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms